ENSGALG00000038420


Gallus gallus

Features
Gene ID: ENSGALG00000038420
  
Biological name :HSF2
  
Synonyms : heat shock transcription factor 2 / HSF2
  
Possible biological names infered from orthology : Heat shock factor protein 2 / P38533 / Q03933
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 61487557
Gene end: 61508738
  
Corresponding Affymetrix probe sets: Gga.2144.1.S1_at (Chicken Array)   Gga.2144.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049218
Ensembl peptide - ENSGALP00000050381
NCBI entrez gene - 421724     See in Manteia.
RefSeq - NM_001167764
RefSeq - XM_015284464
RefSeq Peptide - NP_001161236
swissprot - A0A1D5PC94
swissprot - A0A1D5P919
Ensembl - ENSGALG00000038420
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hsf2ENSDARG00000053097Danio rerio
 HSF2ENSG00000025156Homo sapiens
 Hsf2ENSMUSG00000019878Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HSF3ENSGALG0000004066233
HSF4 / heat shock transcription factor 4 / Q9R0L1* / Q9ULV5* / Heat shock factor protein 4 *ENSGALG0000000322426


Protein motifs (from Interpro)
Interpro ID Name
 IPR000232  Heat shock factor (HSF)-type, DNA-binding
 IPR010542  Vertebrate heat shock transcription factor, C-terminal domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR027712  Heat shock factor protein 2
 IPR027725  Heat shock transcription factor family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0009416 response to light stimulus IDA
 biological_processGO:0010243 response to organonitrogen compound IMP
 biological_processGO:0014070 response to organic cyclic compound IMP
 biological_processGO:0031397 negative regulation of protein ubiquitination IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0050821 protein stabilization IMP
 biological_processGO:0070207 protein homotrimerization IDA
 biological_processGO:1903935 response to sodium arsenite IMP
 cellular_componentGO:0000790 nuclear chromatin IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001162 RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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