ENSDARG00000053097


Danio rerio

Features
Gene ID: ENSDARG00000053097
  
Biological name :hsf2
  
Synonyms : heat shock transcription factor 2 / hsf2
  
Possible biological names infered from orthology : Heat shock factor protein 2 / P38533 / Q03933
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 40475576
Gene end: 40487284
  
Corresponding Affymetrix probe sets: Dr.12595.1.S1_at (Zebrafish Array)   NM_131867_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000069555
Ensembl peptide - ENSDARP00000114882
NCBI entrez gene - 140427     See in Manteia.
RefSeq - NM_131867
RefSeq Peptide - NP_571942
swissprot - Q7SZW8
ZFIN ID - ZDB-GENE-011128-1
Ensembl - ENSDARG00000053097
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HSF2ENSGALG00000038420Gallus gallus
 HSF2ENSG00000025156Homo sapiens
 Hsf2ENSMUSG00000019878Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hsf1 / heat shock transcription factor 1 / P38532* / Q00613* / heat shock factor 1*ENSDARG0000000881834
si:dkey-18a10.3ENSDARG0000009081425
hsf4 / heat shock transcription factor 4 / Q9R0L1* / Q9ULV5* / Heat shock factor protein 4 *ENSDARG0000001325125


Protein motifs (from Interpro)
Interpro ID Name
 IPR000232  Heat shock factor (HSF)-type, DNA-binding
 IPR010542  Vertebrate heat shock transcription factor, C-terminal domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR027712  Heat shock factor protein 2
 IPR027725  Heat shock transcription factor family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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