ENSGALG00000038969


Gallus gallus

Features
Gene ID: ENSGALG00000038969
  
Biological name :HIST2H3L
  
Synonyms : HIST2H3L / Histone H3.2 / P84229
  
Possible biological names infered from orthology : HIST2H3A / Hist2h3b / histone cluster 2 H3 family member a / P84228 / Q71DI3
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 48112892
Gene end: 48113390
  
Corresponding Affymetrix probe sets: Gga.6103.1.S1_at (Chicken Array)   Gga.6103.1.S1_x_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055093
NCBI entrez gene - 769852     See in Manteia.
RefSeq - NM_001281480
RefSeq Peptide - NP_001268409
swissprot - P84229
Ensembl - ENSGALG00000038969
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q71DI3ENSG00000203852Homo sapiens
 P84228ENSMUSG00000074403Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P84229 / Histone H3.2 / P84228* / Hist1h3d* / Hist1h3f*ENSGALG00000035244100
P84229 / Histone H3.2 / P84228* / Hist2h3c2*ENSGALG00000030424100
P84229 / HIST2H3D / Histone H3.2 / Q71DI3* / histone cluster 2 H3 family member d*ENSGALG00000043062100
P84229 / Histone H3.2 ENSGALG00000037930100
P84229 / Histone H3.2 / P84228* / Hist2h3c1*ENSGALG00000040004100
P84229 / Histone H3.2 ENSGALG00000040303100
P84229 / HIST1H3H / Histone H3.2 ENSGALG00000027064100
H3F3C / histone H3.2 / H3.Y* / H3F3B* / H3F3A* / Q6NXT2* / P84243* / P84244* / Histone H3.3 * / H3 histone family member 3B* / H3 histone family member 3A* / H3 histone family member 3C* /...ENSGALG0000002007897
H3F3B / P84247 / Histone H3.3 ENSGALG0000000228667


Protein motifs (from Interpro)
Interpro ID Name
 IPR000164  Histone H3/CENP-A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006334 nucleosome assembly IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0000786 nucleosome IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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