ENSGALG00000043062


Gallus gallus

Features
Gene ID: ENSGALG00000043062
  
Biological name :HIST2H3D
  
Synonyms : HIST2H3D / Histone H3.2 / P84229
  
Possible biological names infered from orthology : histone cluster 2 H3 family member d / Q71DI3
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 48100497
Gene end: 48100907
  
Corresponding Affymetrix probe sets: Gga.6103.1.S1_at (Chicken Array)   Gga.6103.1.S1_x_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046484
NCBI entrez gene - 769809     See in Manteia.
RefSeq - XM_001232832
swissprot - P84229
Ensembl - ENSGALG00000043062
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR762436.2ENSDARG00000112967Danio rerio
 Q71DI3ENSG00000183598Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P84229 / Histone H3.2 / P84228* / Hist1h3d* / Hist1h3f*ENSGALG00000035244100
P84229 / Histone H3.2 / P84228* / Hist2h3c2*ENSGALG00000030424100
P84229 / HIST2H3L / Histone H3.2 / Q71DI3* / P84228* / HIST2H3A* / Hist2h3b* / histone cluster 2 H3 family member a*ENSGALG00000038969100
P84229 / Histone H3.2 ENSGALG00000037930100
P84229 / Histone H3.2 / P84228* / Hist2h3c1*ENSGALG00000040004100
P84229 / Histone H3.2 ENSGALG00000040303100
P84229 / HIST1H3H / Histone H3.2 ENSGALG00000027064100
H3F3C / histone H3.2 / H3.Y* / H3F3B* / H3F3A* / Q6NXT2* / P84243* / P84244* / Histone H3.3 * / H3 histone family member 3B* / H3 histone family member 3A* / H3 histone family member 3C* /...ENSGALG0000002007897
H3F3B / P84247 / Histone H3.3 ENSGALG0000000228667


Protein motifs (from Interpro)
Interpro ID Name
 IPR000164  Histone H3/CENP-A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 cellular_componentGO:0000786 nucleosome IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002283 MAPKAPK3 / Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. / Q16644* / Q3UMW7* / MAP kinase-activated protein kinase 3 * / mitogen-activated prot...  / reaction
 ENSGALG00000003369 KAT2A / lysine acetyltransferase 2A / Q92830* / Q9JHD2* / K(lysine) acetyltransferase 2A*  / reaction
 ENSGALG00000004570 NCOA3 / nuclear receptor coactivator 3 / Q9Y6Q9*  / complex
 ENSGALG00000002942 JMJD1C / jumonji domain containing 1C / Q15652* / Q69ZK6* / Probable JmjC domain-containing histone demethylation protein 2C *  / reaction
 ENSGALG00000003297 HDAC1 / P56517 / Histone deacetylase 1 / O09106* / Q13547* / Gm10093*  / complex
 ENSGALG00000020078 H3F3C / histone H3.2 / H3.Y* / H3F3B* / H3F3A* / Q6NXT2* / P84243* / P84244* / Histone H3.3 * / H3 histone family member 3B* / H3 histone family member 3A* / H3 histone family member 3C* /...  / complex
 ENSGALG00000014060 EED / Q5ZKH3 / Polycomb protein EED / O75530* / Q921E6* / embryonic ectoderm development*  / complex / reaction
 ENSGALG00000011992 EP300 / E1A binding protein p300 / B2RWS6* / Q09472* / Histone acetyltransferase p300 *  / reaction
 ENSGALG00000029270 GATA3 / P23825 / GATA-binding factor 3 / P23771* / P23772* / GATA binding protein 3* / Mus musculus GATA binding protein 3 (Gata3), transcript variant 3, mRNA.*  / reaction / complex
 ENSGALG00000042833 MAPK14 / mitogen-activated protein kinase 14 / P47811* / Q16539*  / reaction
 ENSGALG00000036856 CBX5 / chromobox 5 / P45973* / Q61686* / Mus musculus chromobox 5 (Cbx5), transcript variant 4, mRNA.*  / complex / reaction
 ENSGALG00000043399 EZH2 / enhancer of zeste 2 polycomb repressive complex 2 subunit / Q15910* / Q61188* / Histone-lysine N-methyltransferase EZH2 *  / complex / reaction
 ENSGALG00000002249 AGO1 / argonaute 1, RISC catalytic component / Q8CJG1* / Q9UL18* / Protein argonaute-1 *  / reaction / complex
 ENSGALG00000033631 MYC / P01109 / Myc proto-oncogene protein / Bmyc* / Q6P8Z1* / P01106* / P01108* / Protein B-Myc * / myelocytomatosis oncogene* / MYC proto-oncogene, bHLH transcription factor*  / complex
 ENSGALG00000042491 P62801 / Histone H4   / complex
 ENSGALG00000043062 P84229 / HIST2H3D / Histone H3.2 / Q71DI3* / histone cluster 2 H3 family member d*  / complex
 ENSGALG00000001644 SIN3A / SIN3 transcription regulator family member A / Q60520* / Q96ST3* / Mus musculus transcriptional regulator, SIN3A (yeast) (Sin3a), transcript variant 4, mRNA.*  / complex
 ENSGALG00000011038 CBX3 / Q13185* / chromobox 3* / chromobox protein homolog 3 *  / complex
 ENSGALG00000016022 RUNX1 / runt related transcription factor 1 / Q01196*  / complex
 ENSGALG00000040023 MAPK11 / mitogen-activated protein kinase 11 / Q15759* / Q9WUI1*  / reaction
 ENSGALG00000032713 FOXA1 / forkhead box A1 / P35582* / P55317* / Hepatocyte nuclear factor 3-alpha *  / reaction / complex
 ENSGALG00000041461 DNMT3B / DNA methyltransferase 3 beta / Dnmt3c* / Q9UBC3* / O88509* / DNA (cytosine-5)-methyltransferase 3B *  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr