ENSGALG00000039182


Gallus gallus

Features
Gene ID: ENSGALG00000039182
  
Biological name :TBL1XR1
  
Synonyms : F-box-like/WD repeat-containing protein TBL1XR1 / TBL1XR1
  
Possible biological names infered from orthology : Q8BHJ5 / Q9BZK7 / transducin beta like 1 X-linked receptor 1
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 17991354
Gene end: 18078753
  
Corresponding Affymetrix probe sets: GgaAffx.12040.1.S1_at (Chicken Array)   GgaAffx.21489.1.S1_s_at (Chicken Array)   GgaAffx.8793.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045109
Ensembl peptide - ENSGALP00000057409
NCBI entrez gene - 426284     See in Manteia.
RefSeq - XM_015291431
RefSeq - XM_015291428
RefSeq - XM_015291429
RefSeq - XM_015291430
RefSeq - NM_001031369
RefSeq - XM_015291426
RefSeq - XM_015291427
RefSeq Peptide - NP_001026540
swissprot - A0A1D5PWS2
swissprot - A0A1D5NXL1
Ensembl - ENSGALG00000039182
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbl1xr1aENSDARG00000058696Danio rerio
 tbl1xr1bENSDARG00000008966Danio rerio
 Q9BZK7ENSG00000177565Homo sapiens
 Q8BHJ5ENSMUSG00000027630Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBL1X / TBL1Y* / Q9QXE7* / O60907* / Q9BQ87* / transducin beta like 1 X-linked* / transducin beta like 1 Y-linked* / F-box-like/WD repeat-containing protein TBL1X *ENSGALG0000004000690
THOC3 / Q8VE80* / Q96J01* / THO complex 3* / THO complex subunit 3 *ENSGALG0000002417215


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR006594  LIS1 homology motif
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0002021 response to dietary excess IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0030814 obsolete regulation of cAMP metabolic process IEA
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0050872 white fat cell differentiation IEA
 biological_processGO:0060612 adipose tissue development IEA
 biological_processGO:0060613 fat pad development IEA
 biological_processGO:0090207 regulation of triglyceride metabolic process IEA
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway IEA
 cellular_componentGO:0000118 histone deacetylase complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005876 spindle microtubule IEA
 cellular_componentGO:0017053 transcriptional repressor complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0008013 beta-catenin binding IEA
 molecular_functionGO:0042393 histone binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA
 molecular_functionGO:0047485 protein N-terminus binding IEA


Pathways (from Reactome)
Pathway description
Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000015937 FABP1 / fatty acid binding protein 1 / P07148* / P12710* / Fatty acid-binding protein, liver *  / reaction
 ENSGALG00000041470 PPARA / peroxisome proliferator-activated receptor alpha / P23204* / Q07869*  / complex / reaction
 ENSGALG00000040006 TBL1X / TBL1Y* / Q9QXE7* / O60907* / Q9BQ87* / transducin beta like 1 X-linked* / transducin beta like 1 Y-linked* / F-box-like/WD repeat-containing protein TBL1X *  / reaction / complex






 

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