ENSGALG00000024172


Gallus gallus

Features
Gene ID: ENSGALG00000024172
  
Biological name :THOC3
  
Synonyms : THOC3
  
Possible biological names infered from orthology : Q8VE80 / Q96J01 / THO complex 3 / THO complex subunit 3
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 10437614
Gene end: 10453289
  
Corresponding Affymetrix probe sets: GgaAffx.13039.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000040051
Ensembl peptide - ENSGALP00000060754
Ensembl peptide - ENSGALP00000058938
Ensembl peptide - ENSGALP00000044970
NCBI entrez gene - 416232     See in Manteia.
RefSeq - NM_001030611
RefSeq Peptide - NP_001025782
swissprot - A0A1L1RPP5
swissprot - A0A1L1RJL0
swissprot - A0A1D5NX77
swissprot - F1NUQ0
Ensembl - ENSGALG00000024172
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thoc3ENSDARG00000056517Danio rerio
 THOC3ENSG00000051596Homo sapiens
 Thoc3ENSMUSG00000025872Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBL1XR1 / F-box-like/WD repeat-containing protein TBL1XR1 / Q8BHJ5* / Q9BZK7* / transducin beta like 1 X-linked receptor 1*ENSGALG0000003918220
TBL1X / TBL1Y* / Q9QXE7* / O60907* / Q9BQ87* / transducin beta like 1 X-linked* / transducin beta like 1 Y-linked* / F-box-like/WD repeat-containing protein TBL1X *ENSGALG0000004000620


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR013979  Translation initiation factor, beta propellor-like domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR020472  G-protein beta WD-40 repeat
 IPR024977  Anaphase-promoting complex subunit 4, WD40 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus IBA
 cellular_componentGO:0000445 THO complex part of transcription export complex IBA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr