ENSGALG00000040156


Gallus gallus

Features
Gene ID: ENSGALG00000040156
  
Biological name :CCDC88C
  
Synonyms : CCDC88C / coiled-coil domain containing 88C
  
Possible biological names infered from orthology : Protein Daple / Q6VGS5 / Q9P219
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 44306591
Gene end: 44389396
  
Corresponding Affymetrix probe sets: Gga.12289.1.S1_s_at (Chicken Array)   GgaAffx.23308.1.S1_s_at (Chicken Array)   GgaAffx.23308.2.S1_s_at (Chicken Array)   GgaAffx.23308.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048113
Ensembl peptide - ENSGALP00000054651
Ensembl peptide - ENSGALP00000054515
Ensembl peptide - ENSGALP00000049846
NCBI entrez gene - 423410     See in Manteia.
RefSeq - XM_004941868
RefSeq - XM_015287749
swissprot - A0A1D5PP54
swissprot - A0A1D5PNS1
swissprot - A0A1D5PAT2
swissprot - A0A1D5P5Y9
Ensembl - ENSGALG00000040156
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc88cENSDARG00000053713Danio rerio
 Q9P219ENSG00000015133Homo sapiens
 Q6VGS5ENSMUSG00000021182Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CCDC88A / coiled-coil domain containing 88A / Q3V6T2* / Q5SNZ0* / Girdin *ENSGALG0000004358738
HOOK1 / protein Hook homolog 1 / 1 * / Q9UJC3* / Q8BIL5* / hook microtubule tethering protein 1*ENSGALG000000108898
HOOK3 / hook microtubule tethering protein 3 / 3 * / Q86VS8* / Q8BUK6*ENSGALG000000153908


Protein motifs (from Interpro)
Interpro ID Name
 IPR008636  Hook-like protein family
 IPR027719  Protein Daple


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001932 regulation of protein phosphorylation IEA
 biological_processGO:0016055 Wnt signaling pathway IEA
 biological_processGO:0031098 stress-activated protein kinase signaling cascade IEA
 biological_processGO:0031648 protein destabilization IEA
 biological_processGO:0051260 protein homooligomerization IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0030165 PDZ domain binding IEA
 molecular_functionGO:0043621 protein self-association IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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