ENSGALG00000043587


Gallus gallus

Features
Gene ID: ENSGALG00000043587
  
Biological name :CCDC88A
  
Synonyms : CCDC88A / coiled-coil domain containing 88A
  
Possible biological names infered from orthology : Girdin / Q3V6T2 / Q5SNZ0
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 69107
Gene end: 140717
  
Corresponding Affymetrix probe sets: Gga.14884.1.S1_at (Chicken Array)   Gga.14884.1.S1_s_at (Chicken Array)   GgaAffx.12589.1.S1_s_at (Chicken Array)   GgaAffx.5084.1.S1_at (Chicken Array)   GgaAffx.5084.2.S1_s_at (Chicken Array)   GgaAffx.5084.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044615
Ensembl peptide - ENSGALP00000057410
Ensembl peptide - ENSGALP00000053844
Ensembl peptide - ENSGALP00000047193
NCBI entrez gene - 421210     See in Manteia.
RefSeq - XM_015283338
RefSeq - XM_015283333
RefSeq - XM_015283335
RefSeq - XM_015283336
RefSeq - XM_015283337
RefSeq - XM_004940104
RefSeq - XM_004940105
RefSeq - XM_015283321
RefSeq - XM_015283322
RefSeq - XM_015283323
RefSeq - XM_015283325
RefSeq - XM_015283326
RefSeq - XM_015283327
RefSeq - XM_015283328
RefSeq - XM_015283329
RefSeq - XM_015283330
RefSeq - XM_015283331
RefSeq - XM_015283332
swissprot - A0A1D5PWS3
swissprot - A0A1D5PLX3
swissprot - A0A1D5P3D8
swissprot - A0A1D5NW79
Ensembl - ENSGALG00000043587
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc88aaENSDARG00000078440Danio rerio
 Q3V6T2ENSG00000115355Homo sapiens
 Q5SNZ0ENSMUSG00000032740Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CCDC88C / coiled-coil domain containing 88C / Q6VGS5* / Q9P219* / Protein Daple *ENSGALG0000004015648
HOOK1 / protein Hook homolog 1 / 1 * / Q9UJC3* / Q8BIL5* / hook microtubule tethering protein 1*ENSGALG000000108898
HOOK3 / hook microtubule tethering protein 3 / 3 * / Q86VS8* / Q8BUK6*ENSGALG000000153908


Protein motifs (from Interpro)
Interpro ID Name
 IPR008636  Hook-like protein family
 IPR027717  Girdin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001932 regulation of protein phosphorylation IEA
 biological_processGO:0006275 regulation of DNA replication IEA
 biological_processGO:0010975 regulation of neuron projection development IEA
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0030032 lamellipodium assembly IEA
 biological_processGO:0031929 TOR signaling IEA
 biological_processGO:0032148 activation of protein kinase B activity IEA
 biological_processGO:0032956 regulation of actin cytoskeleton organization IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0045724 positive regulation of cilium assembly IEA
 biological_processGO:0061024 membrane organization IEA
 biological_processGO:1903566 positive regulation of protein localization to cilium IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0031252 cell leading edge IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0043422 protein kinase B binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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