ENSDARG00000078440


Danio rerio

Features
Gene ID: ENSDARG00000078440
  
Biological name :ccdc88aa
  
Synonyms : ccdc88aa / coiled-coil domain containing 88Aa
  
Possible biological names infered from orthology : CCDC88A / coiled-coil domain containing 88A / Girdin / Q3V6T2 / Q5SNZ0
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 6301205
Gene end: 6346557
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000099266
Ensembl peptide - ENSDARP00000144225
swissprot - A0A286YAN0
swissprot - E7FGH9
ZFIN ID - ZDB-GENE-100701-2
Ensembl - ENSDARG00000078440
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCDC88AENSGALG00000043587Gallus gallus
 Q3V6T2ENSG00000115355Homo sapiens
 Q5SNZ0ENSMUSG00000032740Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccdc88c / coiled-coil domain containing 88C / Q6VGS5* / Q9P219* / Protein Daple *ENSDARG0000005371343
ccdc88b / coiled-coil domain containing 88B / A6NC98* / Q4QRL3* / Coiled-coil domain-containing protein 88B *ENSDARG0000007618931
hook1 / Q5TZ80 / hook microtubule-tethering protein 1 / 1 * / Q8BIL5* / Q9UJC3*ENSDARG0000004294611
HOOK3 / hook microtubule tethering protein 3 / Q86VS8*ENSDARG000001143298
hook2 / hook microtubule-tethering protein 2 / 2 * / Q7TMK6* / Q96ED9*ENSDARG000000992357
hook2 / hook microtubule-tethering protein 2 / 2 * / Q7TMK6* / Q96ED9*ENSDARG000000393093


Protein motifs (from Interpro)
Interpro ID Name
 IPR008636  Hook-like protein family
 IPR027717  Girdin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0030705 cytoskeleton-dependent intracellular transport IBA
 biological_processGO:0031122 cytoplasmic microtubule organization IBA
 biological_processGO:0032956 regulation of actin cytoskeleton organization IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005813 centrosome IBA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0008017 microtubule binding IBA
 molecular_functionGO:0051959 dynein light intermediate chain binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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