ENSDARG00000042946


Danio rerio

Features
Gene ID: ENSDARG00000042946
  
Biological name :hook1
  
Synonyms : hook1 / hook microtubule-tethering protein 1 / Q5TZ80
  
Possible biological names infered from orthology : 1 / Q8BIL5 / Q9UJC3
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 25486021
Gene end: 25513483
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000141370
Ensembl peptide - ENSDARP00000063051
NCBI entrez gene - 570393     See in Manteia.
RefSeq - NM_001045198
RefSeq Peptide - NP_001038663
swissprot - A0A0R4IZI6
swissprot - Q5TZ80
ZFIN ID - ZDB-GENE-041001-159
Ensembl - ENSDARG00000042946
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HOOK1ENSGALG00000010889Gallus gallus
 HOOK1ENSG00000134709Homo sapiens
 1 ENSMUSG00000028572Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOOK3 / hook microtubule tethering protein 3 / Q86VS8*ENSDARG0000011432933
hook2 / hook microtubule-tethering protein 2 / 2 * / Q7TMK6* / Q96ED9*ENSDARG0000009923532
ccdc88c / coiled-coil domain containing 88C / Q6VGS5* / Q9P219* / Protein Daple *ENSDARG0000005371324
ccdc88b / coiled-coil domain containing 88B / A6NC98* / Q4QRL3* / Coiled-coil domain-containing protein 88B *ENSDARG0000007618921
ccdc88aa / coiled-coil domain containing 88Aa / Q5SNZ0* / Q3V6T2* / Girdin * / CCDC88A* / coiled-coil domain containing 88A*ENSDARG0000007844020
hook2 / hook microtubule-tethering protein 2 / 2 * / Q7TMK6* / Q96ED9*ENSDARG0000003930915


Protein motifs (from Interpro)
Interpro ID Name
 IPR008636  Hook-like protein family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007032 endosome organization ISS
 biological_processGO:0007040 lysosome organization ISS
 biological_processGO:0008333 endosome to lysosome transport ISS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030705 cytoskeleton-dependent intracellular transport IBA
 biological_processGO:0031122 cytoplasmic microtubule organization IBA
 biological_processGO:0045022 early endosome to late endosome transport ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0070695 FHF complex ISS
 molecular_functionGO:0008017 microtubule binding IBA
 molecular_functionGO:0051959 dynein light intermediate chain binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr