ENSDARG00000076189


Danio rerio

Features
Gene ID: ENSDARG00000076189
  
Biological name :ccdc88b
  
Synonyms : ccdc88b / coiled-coil domain containing 88B
  
Possible biological names infered from orthology : A6NC98 / Coiled-coil domain-containing protein 88B / Q4QRL3
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 45702521
Gene end: 45772506
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097967
Ensembl peptide - ENSDARP00000098257
NCBI entrez gene - 100330741     See in Manteia.
RefSeq - XM_002664480
swissprot - F1QIY3
swissprot - F1QPU7
ZFIN ID - ZDB-GENE-080303-31
Ensembl - ENSDARG00000076189
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A6NC98ENSG00000168071Homo sapiens
 Q4QRL3ENSMUSG00000047810Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccdc88c / coiled-coil domain containing 88C / Q6VGS5* / Q9P219* / Protein Daple *ENSDARG0000005371330
ccdc88aa / coiled-coil domain containing 88Aa / Q5SNZ0* / Q3V6T2* / Girdin * / CCDC88A* / coiled-coil domain containing 88A*ENSDARG0000007844025
hook1 / Q5TZ80 / hook microtubule-tethering protein 1 / 1 * / Q8BIL5* / Q9UJC3*ENSDARG0000004294610
HOOK3 / hook microtubule tethering protein 3 / Q86VS8*ENSDARG000001143296
hook2 / hook microtubule-tethering protein 2 / 2 * / Q7TMK6* / Q96ED9*ENSDARG000000992355
hook2 / hook microtubule-tethering protein 2 / 2 * / Q7TMK6* / Q96ED9*ENSDARG000000393092


Protein motifs (from Interpro)
Interpro ID Name
 IPR008636  Hook-like protein family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030705 cytoskeleton-dependent intracellular transport IBA
 biological_processGO:0031122 cytoplasmic microtubule organization IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005813 centrosome IBA
 molecular_functionGO:0008017 microtubule binding IBA
 molecular_functionGO:0051959 dynein light intermediate chain binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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