ENSG00000168071


Homo sapiens

Features
Gene ID: ENSG00000168071
  
Biological name :CCDC88B
  
Synonyms : A6NC98 / CCDC88B / coiled-coil domain containing 88B
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q13.1
Gene start: 64340223
Gene end: 64357534
  
Corresponding Affymetrix probe sets: 223663_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000352974
Ensembl peptide - ENSP00000301897
Ensembl peptide - ENSP00000349238
NCBI entrez gene - 283234     See in Manteia.
OMIM - 611205
RefSeq - XM_011544962
RefSeq - XM_011544957
RefSeq - XM_011544959
RefSeq - XM_011544960
RefSeq - NM_032251
RefSeq - XM_006718519
RefSeq Peptide - NP_115627
swissprot - H7BY33
swissprot - A6NC98
Ensembl - ENSG00000168071
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc88bENSDARG00000076189Danio rerio
 Q4QRL3ENSMUSG00000047810Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9P219 / CCDC88C / coiled-coil domain containing 88CENSG0000001513331
Q3V6T2 / CCDC88A / coiled-coil domain containing 88AENSG0000011535529
HOOK2 / Q96ED9 / hook microtubule tethering protein 2ENSG0000009506612
HOOK3 / Q86VS8 / hook microtubule tethering protein 3ENSG0000016817211
HOOK1 / Q9UJC3 / hook microtubule tethering protein 1ENSG0000013470910


Protein motifs (from Interpro)
Interpro ID Name
 IPR008636  Hook-like protein family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001819 positive regulation of cytokine production ISS
 biological_processGO:0030705 cytoskeleton-dependent intracellular transport IBA
 biological_processGO:0031122 cytoplasmic microtubule organization IBA
 biological_processGO:0042102 positive regulation of T cell proliferation ISS
 biological_processGO:0042832 defense response to protozoan IEA
 biological_processGO:0050870 positive regulation of T cell activation ISS
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005813 centrosome IBA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0008017 microtubule binding IBA
 molecular_functionGO:0051959 dynein light intermediate chain binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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