ENSGALG00000040265


Gallus gallus

Features
Gene ID: ENSGALG00000040265
  
Biological name :USP30
  
Synonyms : ubiquitin specific peptidase 30 / USP30
  
Possible biological names infered from orthology : Q3UN04 / Q70CQ3
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 6692085
Gene end: 6700427
  
Corresponding Affymetrix probe sets: Gga.11241.1.A1_at (Chicken Array)   Gga.11774.1.S1_at (Chicken Array)   Gga.17448.1.S1_at (Chicken Array)   Gga.17448.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053066
Ensembl peptide - ENSGALP00000055975
NCBI entrez gene - 416896     See in Manteia.
RefSeq - XM_415187
RefSeq - XM_015275520
swissprot - A0A1D5PST6
swissprot - A0A1D5PJS0
Ensembl - ENSGALG00000040265
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp30ENSDARG00000056842Danio rerio
 USP30ENSG00000135093Homo sapiens
 Usp30ENSMUSG00000029592Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000422 autophagy of mitochondrion IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0008053 mitochondrial fusion IEA
 biological_processGO:0016579 protein deubiquitination IEA
 biological_processGO:0035871 protein K11-linked deubiquitination IEA
 biological_processGO:0044313 protein K6-linked deubiquitination IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004197 cysteine-type endopeptidase activity IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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