ENSMUSG00000029592


Mus musculus

Features
Gene ID: ENSMUSG00000029592
  
Biological name :Usp30
  
Synonyms : Q3UN04 / ubiquitin specific peptidase 30 / Usp30
  
Possible biological names infered from orthology : Q70CQ3
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: F
Gene start: 114065461
Gene end: 114124720
  
Corresponding Affymetrix probe sets: 10524436 (MoGene1.0st)   1436009_at (Mouse Genome 430 2.0 Array)   1455598_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142350
Ensembl peptide - ENSMUSP00000144522
Ensembl peptide - ENSMUSP00000031588
NCBI entrez gene - 100756     See in Manteia.
MGI - MGI:2140991
RefSeq - XM_011248156
RefSeq - XM_017320581
RefSeq - NM_001033202
RefSeq Peptide - NP_001028374
swissprot - Q3UN04
swissprot - A0A0J9YV73
swissprot - A0A0G2JDF7
Ensembl - ENSMUSG00000029592
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp30ENSDARG00000056842Danio rerio
 USP30ENSGALG00000040265Gallus gallus
 USP30ENSG00000135093Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000422 autophagy of mitochondrion IEA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0008053 mitochondrial fusion IMP
 biological_processGO:0016579 protein deubiquitination IEA
 biological_processGO:0035871 protein K11-linked deubiquitination IEA
 biological_processGO:0044313 protein K6-linked deubiquitination IEA
 biological_processGO:1901525 negative regulation of mitophagy IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004197 cysteine-type endopeptidase activity IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000017686 Rhot1 / Q8BG51 / ras homolog family member T1 / Q8IXI2*  / complex
 ENSMUSG00000093904 Q9DCC8 / Tomm20 / translocase of outer mitochondrial membrane 20 homolog (yeast) / Q15388* / translocase of outer mitochondrial membrane 20*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr