ENSGALG00000041179


Gallus gallus

Features
Gene ID: ENSGALG00000041179
  
Biological name :VPS13B
  
Synonyms : vacuolar protein sorting 13 homolog B / VPS13B
  
Possible biological names infered from orthology : Q7Z7G8 / Q80TY5 / vacuolar protein sorting 13B
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 128662474
Gene end: 128890608
  
Corresponding Affymetrix probe sets: Gga.11696.1.S1_at (Chicken Array)   Gga.14869.1.S1_at (Chicken Array)   Gga.19244.1.A1_at (Chicken Array)   Gga.19244.1.S1_at (Chicken Array)   GgaAffx.10211.1.S1_at (Chicken Array)   GgaAffx.10213.1.S1_at (Chicken Array)   GgaAffx.24828.1.S1_at (Chicken Array)   GgaAffx.24828.1.S1_s_at (Chicken Array)   GgaAffx.24828.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058230
NCBI entrez gene - 420242     See in Manteia.
RefSeq - XM_015282973
swissprot - A0A1D5PZ22
Ensembl - ENSGALG00000041179
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps13aENSDARG00000039225Danio rerio
 Q7Z7G8ENSG00000132549Homo sapiens
 Q80TY5ENSMUSG00000037646Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VPS13D / vacuolar protein sorting 13 homolog D / Q5THJ4* / vacuolar protein sorting 13D*ENSGALG0000003477713
VPS13C / vacuolar protein sorting 13 homolog C / Q709C8* / Q8BX70* / vacuolar protein sorting 13C*ENSGALG0000000370512
VPS13A / vacuolar protein sorting-associated protein 13A ENSGALG0000001517011
ENSGALG000000460930
ENSGALG000000447920


Protein motifs (from Interpro)
Interpro ID Name
 IPR009543  Vacuolar protein sorting-associated protein 13, SHR-binding domain
 IPR031645  Vacuolar protein sorting-associated protein 13, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr