ENSGALG00000041309


Gallus gallus

Features
Gene ID: ENSGALG00000041309
  
Biological name :ALKBH3
  
Synonyms : ALKBH3 / alpha-ketoglutarate-dependent dioxygenase alkB homolog 3
  
Possible biological names infered from orthology : alkB homolog 3, alpha-ketoglutaratedependent dioxygenase / Gm27027 / Q8K1E6 / Q96Q83
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 21648706
Gene end: 21664803
  
Corresponding Affymetrix probe sets: Gga.16493.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047082
NCBI entrez gene - 423169     See in Manteia.
RefSeq - NM_001282377
RefSeq Peptide - NP_001269306
swissprot - A0A1D5P329
Ensembl - ENSGALG00000041309
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alkbh3ENSDARG00000045606Danio rerio
 ALKBH3ENSG00000166199Homo sapiens
 Alkbh3ENSMUSG00000040174Mus musculus
 Gm27027ENSMUSG00000098004Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ALKBH2 / alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 isoform 1 / Q6NS38* / Q6P6J4* / DNA oxidative demethylase ALKBH2 * / alkB homolog 2, alpha-ketoglutarate dependent dioxygenase*ENSGALG0000003515229


Protein motifs (from Interpro)
Interpro ID Name
 IPR005123  Oxoglutarate/iron-dependent dioxygenase
 IPR027450  Alpha-ketoglutarate-dependent dioxygenase AlkB-like
 IPR032854  Alkylated DNA repair protein alkB homologue 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006307 DNA dealkylation involved in DNA repair IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0035552 oxidative single-stranded DNA demethylation IEA
 biological_processGO:0035553 oxidative single-stranded RNA demethylation IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0008198 ferrous iron binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0043734 DNA-N1-methyladenine dioxygenase activity IEA
 molecular_functionGO:0051213 dioxygenase activity IEA
 molecular_functionGO:1990930 RNA N1-methyladenosine dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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