ENSGALG00000042900


Gallus gallus

Features
Gene ID: ENSGALG00000042900
  
Biological name :GATAD2A
  
Synonyms : GATAD2A / GATA zinc finger domain containing 2A
  
Possible biological names infered from orthology : Q86YP4 / Q8CHY6 / Transcriptional repressor p66 alpha
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 3474607
Gene end: 3515989
  
Corresponding Affymetrix probe sets: Gga.8784.1.S1_at (Chicken Array)   Gga.8784.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051817
Ensembl peptide - ENSGALP00000058049
Ensembl peptide - ENSGALP00000051623
NCBI entrez gene - 420109     See in Manteia.
RefSeq - XM_015300046
RefSeq - XM_015300043
RefSeq - XM_015300044
RefSeq - XM_015300045
RefSeq - NM_001012552
RefSeq - XM_015300041
RefSeq - XM_015300042
RefSeq Peptide - NP_001012570
swissprot - A0A1D5PYJ4
swissprot - A0A1D5PG96
Ensembl - ENSGALG00000042900
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gatad2abENSDARG00000006192Danio rerio
 Q86YP4ENSG00000167491Homo sapiens
 Q8CHY6ENSMUSG00000036180Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000679  Zinc finger, GATA-type
 IPR013088  Zinc finger, NHR/GATA-type
 IPR032346  Transcriptional repressor p66, coiled-coil MBD2-interaction domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016581 NuRD complex IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0030674 protein binding, bridging IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Acetylation
RNA Polymerase I Transcription Initiation
Regulation of PTEN gene transcription


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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