ENSGALG00000042994


Gallus gallus

Features
Gene ID: ENSGALG00000042994
  
Biological name :DDX41
  
Synonyms : DDX41 / DEAD-box helicase 41
  
Possible biological names infered from orthology : Probable ATP-dependent RNA helicase DDX41 / Q91VN6 / Q9UJV9
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 10176016
Gene end: 10181982
  
Corresponding Affymetrix probe sets: Gga.17098.1.S1_s_at (Chicken Array)   GgaAffx.21124.1.S1_at (Chicken Array)   GgaAffx.25721.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046898
Ensembl peptide - ENSGALP00000048633
Ensembl peptide - ENSGALP00000050165
swissprot - A0A1D5P7E4
swissprot - A0A1D5PBN5
Ensembl - ENSGALG00000042994
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DDX41ENSG00000183258Homo sapiens
 Ddx41ENSMUSG00000021494Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DDX3X / DDX3Y* / Q62167* / D1Pas1* / O00571* / O15523* / P16381* / Q62095* / DEAD-box helicase 3, X-linked* / DEAD-box helicase 3, Y-linked* / ATP-dependent RNA helicase DDX3Y * / ATP-depen...ENSGALG0000001623131
DDX4 / DEAD-box helicase 4 / Q61496* / Q9NQI0* / ATP-dependent RNA helicase DDX4 *ENSGALG0000001471326
DDX59 / DEAD-box helicase 59 / Q5T1V6* / Q9DBN9* / Probable ATP-dependent RNA helicase DDX59 *ENSGALG0000000216424
DDX1 / ATP-dependent RNA helicase DDX1 / Q91VR5* / Q92499* / DEAD-box helicase 1*ENSGALG0000001646120


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR001878  Zinc finger, CCHC-type
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0035458 cellular response to interferon-beta IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051607 defense response to virus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
STING mediated induction of host immune responses


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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