ENSGALG00000043868


Gallus gallus

Features
Gene ID: ENSGALG00000043868
  
Biological name :FOXN1
  
Synonyms : forkhead box N1 / FOXN1
  
Possible biological names infered from orthology : Forkhead box protein N1 / O15353 / Q61575
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 5700305
Gene end: 5713924
  
Corresponding Affymetrix probe sets: GgaAffx.2280.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005780
NCBI entrez gene - 417570     See in Manteia.
RefSeq - XM_015296058
RefSeq - XM_015296059
RefSeq - XM_415816
swissprot - E1C4U8
Ensembl - ENSGALG00000043868
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 foxn1ENSDARG00000011879Danio rerio
 FOXN1ENSG00000109101Homo sapiens
 Foxn1ENSMUSG00000002057Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FOXN4 / forkhead box N4 / Q8K3Q3* / Q96NZ1* / Forkhead box protein N4 *ENSGALG0000000506233
FOXN3 / forkhead box N3 / O00409* / Q499D0* / Forkhead box protein N3 *ENSGALG0000001066514
FOXK1 / forkhead box K1 / P42128* / P85037* / Forkhead box protein K1 *ENSGALG0000000446013
FOXK2 / forkhead box K2 / Q01167* / Q3UCQ1* / Forkhead box protein K2 *ENSGALG0000000157713
FOXN2 / forkhead box N2 / P32314* / Mus musculus forkhead box N2 (Foxn2), transcript variant 3, mRNA.*ENSGALG0000000894212
FOXJ1 / Gallus gallus forkhead box J1 (FOXJ1), mRNA. / Q61660* / Q92949* / forkhead box J1* / Forkhead box protein J1 *ENSGALG0000004102512
FOXJ2 / forkhead box J2 / Q9ES18* / Q9P0K8* / Forkhead box protein J2 *ENSGALG0000001432912


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR030456  Fork head domain conserved site 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001942 hair follicle development IEA
 biological_processGO:0002260 lymphocyte homeostasis IEA
 biological_processGO:0002360 T cell lineage commitment IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0008544 epidermis development IEA
 biological_processGO:0009653 anatomical structure morphogenesis IBA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0030097 hemopoiesis IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0030216 keratinocyte differentiation IEA
 biological_processGO:0030858 positive regulation of epithelial cell differentiation IEA
 biological_processGO:0033081 regulation of T cell differentiation in thymus IEA
 biological_processGO:0035878 nail development IEA
 biological_processGO:0043029 T cell homeostasis IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048514 blood vessel morphogenesis IEA
 biological_processGO:0048538 thymus development IEA
 biological_processGO:0050673 epithelial cell proliferation IEA
 biological_processGO:0051798 positive regulation of hair follicle development IEA
 biological_processGO:0097535 lymphoid lineage cell migration into thymus IEA
 biological_processGO:0097536 thymus epithelium morphogenesis IEA
 biological_processGO:1902232 regulation of positive thymic T cell selection IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr