ENSMUSG00000000402


Mus musculus

Features
Gene ID: ENSMUSG00000000402
  
Biological name :Egfl6
  
Synonyms : Egfl6 / Epidermal growth factor-like protein 6 / Q9JJZ5
  
Possible biological names infered from orthology : EGF like domain multiple 6 / Q8IUX8
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: F5
Gene start: 166523007
Gene end: 166585720
  
Corresponding Affymetrix probe sets: 10607848 (MoGene1.0st)   1419332_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000000412
NCBI entrez gene - 54156     See in Manteia.
MGI - MGI:1858599
RefSeq - NM_019397
RefSeq Peptide - NP_062270
swissprot - Q9JJZ5
Ensembl - ENSMUSG00000000402
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 egfl6ENSDARG00000045958Danio rerio
 EGFL6ENSGALG00000016584Gallus gallus
 EGFL6ENSG00000198759Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Npnt / Q91V88 / Nephronectin / Q6UXI9*ENSMUSG0000004099839
Egfl7 / EGF like domain multiple 7 / Q9UHF1*ENSMUSG0000002692112
Egfl8 / Q6GUQ1 / Epidermal growth factor-like protein 8 / Q99944* / EGF like domain multiple 8*ENSMUSG0000001546711


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR000998  MAM domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR018097  EGF-like calcium-binding, conserved site
 IPR032930  Epidermal growth factor-like protein 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IDA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030198 extracellular matrix organization IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005604 basement membrane IDA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Pax2tm1Gdr/Pax2tm1.1Gdr
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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