ENSMUSG00000000740


Mus musculus

Features
Gene ID: ENSMUSG00000000740
  
Biological name :Rpl13
  
Synonyms : 60S ribosomal protein L13 / P47963 / Rpl13
  
Possible biological names infered from orthology : P26373 / ribosomal protein L13
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: E1
Gene start: 123102350
Gene end: 123105244
  
Corresponding Affymetrix probe sets: 10379875 (MoGene1.0st)   10415660 (MoGene1.0st)   10440661 (MoGene1.0st)   10472587 (MoGene1.0st)   10492229 (MoGene1.0st)   10501179 (MoGene1.0st)   10503249 (MoGene1.0st)   10531340 (MoGene1.0st)   10576210 (MoGene1.0st)   10576216 (MoGene1.0st)   1450150_a_at (Mouse Genome 430 2.0 Array)   1455245_x_at (Mouse Genome 430 2.0 Array)   1460581_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000000756
NCBI entrez gene - 270106     See in Manteia.
MGI - MGI:105922
RefSeq - NM_016738
RefSeq Peptide - NP_058018
swissprot - P47963
Ensembl - ENSMUSG00000000740
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl13ENSDARG00000099380Danio rerio
 RPL13ENSGALG00000006179Gallus gallus
 RPL13ENSG00000167526Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001380  Ribosomal protein L13e
 IPR018256  Ribosomal protein L13e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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