ENSMUSG00000001095


Mus musculus

Features
Gene ID: ENSMUSG00000001095
  
Biological name :Slc13a2
  
Synonyms : Q9ES88 / Slc13a2 / Solute carrier family 13 member 2
  
Possible biological names infered from orthology : Q13183
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B5
Gene start: 78397087
Gene end: 78422217
  
Corresponding Affymetrix probe sets: 10388834 (MoGene1.0st)   1418857_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000001122
NCBI entrez gene - 20500     See in Manteia.
MGI - MGI:1276558
RefSeq - NM_022411
RefSeq - XM_006532645
RefSeq Peptide - NP_071856
swissprot - Q9ES88
Ensembl - ENSMUSG00000001095
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc13a2ENSDARG00000053853Danio rerio
 SLC13A2ENSGALG00000003647Gallus gallus
 Q13183ENSG00000007216Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q67BT3 / Slc13a5 / Solute carrier family 13 member 5 / Q86YT5*ENSMUSG0000002080549
Q91Y63 / Slc13a3 / solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 / Q8WWT9* / solute carrier family 13 member 3*ENSMUSG0000001845946
Slc13a4 / solute carrier family 13 member 4 / Q9UKG4*ENSMUSG0000002984341
Q9JHI4 / Slc13a1 / Solute carrier family 13 member 1 / Q9BZW2*ENSMUSG0000002970041


Protein motifs (from Interpro)
Interpro ID Name
 IPR001898  Solute carrier family 13
 IPR031312  Sodium/sulphate symporter, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0098656 anion transmembrane transport IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IBA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Sodium-coupled sulphate, di- and tri-carboxylate transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002893 ketoaciduria "excretion of urine having an elevated concentration of keto acids" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
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Allelic Composition: Tyrc-a/Tyrc-ch
Genetic Background: involves: C3H/HeJ

 MP:0009643 abnormal urine homeostasis "anomaly in the processes involved in the maintenance of an internal equilibrium of various functions and chemical or protein composition of the urine" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Tyrc-a/Tyrc-ch
Genetic Background: involves: C3H/HeJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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