ENSMUSG00000003970


Mus musculus

Features
Gene ID: ENSMUSG00000003970
  
Biological name :Rpl8
  
Synonyms : 60S ribosomal protein L8 / P62918 / Rpl8
  
Possible biological names infered from orthology : P62917 / ribosomal protein L8
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: D3
Gene start: 76904078
Gene end: 76906314
  
Corresponding Affymetrix probe sets: 10425018 (MoGene1.0st)   1417762_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000004072
Ensembl peptide - ENSMUSP00000155657
NCBI entrez gene - 26961     See in Manteia.
MGI - MGI:1350927
RefSeq - NM_012053
RefSeq Peptide - NP_036183
swissprot - P62918
Ensembl - ENSMUSG00000003970
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl8ENSDARG00000014867Danio rerio
 RPL8ENSGALG00000016232Gallus gallus
 RPL8ENSG00000161016Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002171  Ribosomal protein L2
 IPR008991  Translation protein SH3-like domain superfamily
 IPR012340  Nucleic acid-binding, OB-fold
 IPR014722  Ribosomal protein L2, domain 2
 IPR014726  Ribosomal protein L2, domain 3
 IPR022666  Ribosomal Proteins L2, RNA binding domain
 IPR022669  Ribosomal protein L2, C-terminal
 IPR022671  Ribosomal protein L2, conserved site
 IPR023672  Ribosomal protein L2, archaeal-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IDA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IDA
 cellular_componentGO:0042788 polysomal ribosome IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019843 rRNA binding IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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