ENSMUSG00000006456


Mus musculus

Features
Gene ID: ENSMUSG00000006456
  
Biological name :Rbm14
  
Synonyms : Q8C2Q3 / Rbm14 / RNA-binding protein 14
  
Possible biological names infered from orthology : Q96PK6 / RNA binding motif protein 14
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: A
Gene start: 4800569
Gene end: 4811634
  
Corresponding Affymetrix probe sets: 10464819 (MoGene1.0st)   1436979_x_at (Mouse Genome 430 2.0 Array)   1437032_x_at (Mouse Genome 430 2.0 Array)   1450569_a_at (Mouse Genome 430 2.0 Array)   1452003_at (Mouse Genome 430 2.0 Array)   1456566_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000109424
Ensembl peptide - ENSMUSP00000137466
Ensembl peptide - ENSMUSP00000006625
NCBI entrez gene - 56275     See in Manteia.
MGI - MGI:1929092
RefSeq - NM_019869
RefSeq Peptide - NP_063922
swissprot - Q8C2Q3
swissprot - E9QL13
swissprot - J3QPT3
Ensembl - ENSMUSG00000006456
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm14aENSDARG00000012723Danio rerio
 rbm14bENSDARG00000103834Danio rerio
 RBM14ENSG00000239306Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rbm4 / Q8C7Q4 / RNA binding motif protein 4 / Q9BWF3*ENSMUSG0000009493617
Rbm4b / Q8VE92 / RNA-binding protein 4B / Q9BQ04* / RNA binding motif protein 4B*ENSMUSG0000003376017
Gm21992 / RBM4* / Q9BWF3* / RNA binding motif protein 4*ENSMUSG0000009637017


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034506  RBM14, RNA recognition motif 1
 IPR034507  RBM14, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002218 activation of innate immune response IEA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0016575 histone deacetylation IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0046600 negative regulation of centriole replication IEA
 biological_processGO:0060395 SMAD protein signal transduction IDA
 biological_processGO:0098534 centriole assembly IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IEA


Pathways (from Reactome)
Pathway description
RUNX2 regulates bone development


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000039153 Runx2 / Q08775 / runt related transcription factor 2 / Q13950*  / reaction / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr