ENSMUSG00000009470


Mus musculus

Features
Gene ID: ENSMUSG00000009470
  
Biological name :Tnpo1
  
Synonyms : Q8BFY9 / Tnpo1 / transportin 1
  
Possible biological names infered from orthology : Q92973
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: D1
Gene start: 98839019
Gene end: 98926384
  
Corresponding Affymetrix probe sets: 10411491 (MoGene1.0st)   1419864_x_at (Mouse Genome 430 2.0 Array)   1433585_at (Mouse Genome 430 2.0 Array)   1455043_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000105026
Ensembl peptide - ENSMUSP00000105028
Ensembl peptide - ENSMUSP00000136496
Ensembl peptide - ENSMUSP00000136917
NCBI entrez gene - 238799     See in Manteia.
MGI - MGI:2681523
RefSeq - XM_006517637
RefSeq - NM_001048267
RefSeq - NM_178716
RefSeq - XM_006517636
RefSeq Peptide - NP_848831
RefSeq Peptide - NP_001041732
swissprot - Q3TKD0
swissprot - Q8BFY9
swissprot - J3QMX2
Ensembl - ENSMUSG00000009470
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnpo1ENSDARG00000035390Danio rerio
 TNPO1ENSGALG00000015014Gallus gallus
 TNPO1ENSG00000083312Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tnpo2 / Q99LG2 / transportin 2 (importin 3, karyopherin beta 2b) / O14787* / transportin 2*ENSMUSG0000003169185


Protein motifs (from Interpro)
Interpro ID Name
 IPR001494  Importin-beta, N-terminal domain
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000060 protein import into nucleus, translocation IBA
 biological_processGO:0006607 NLS-bearing protein import into nucleus IBA
 biological_processGO:0006610 ribosomal protein import into nucleus IBA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0031965 nuclear membrane IBA
 cellular_componentGO:0034399 nuclear periphery IBA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0008536 Ran GTPase binding IEA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
Intraflagellar transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000028758 Kif17 / Q99PW8 / Kinesin-like protein KIF17 / Q9P2E2* / kinesin family member 17*  / complex / reaction






 

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