ENSMUSG00000018387


Mus musculus

Features
Gene ID: ENSMUSG00000018387
  
Biological name :Shroom1
  
Synonyms : Q5SX79 / Shroom1 / shroom family member 1
  
Possible biological names infered from orthology : Q2M3G4
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B1.3
Gene start: 53457205
Gene end: 53467766
  
Corresponding Affymetrix probe sets: 10376007 (MoGene1.0st)   1456371_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000018531
Ensembl peptide - ENSMUSP00000090802
Ensembl peptide - ENSMUSP00000104641
NCBI entrez gene - 71774     See in Manteia.
MGI - MGI:1919024
RefSeq - XM_006534259
RefSeq - NM_001290789
RefSeq - NM_027917
RefSeq Peptide - NP_001277718
RefSeq Peptide - NP_082193
swissprot - Q5SX79
swissprot - D3Z3D5
Ensembl - ENSMUSG00000018387
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 shroom1ENSDARG00000094181Danio rerio
 ENSGALG00000007080Gallus gallus
 Q2M3G4ENSG00000164403Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Shroom3 / shroom family member 3 / Q8TF72*ENSMUSG0000002938124
A2ALU4 / Shroom2 / shroom family member 2 / Q13796*ENSMUSG0000004518021
Q1W617 / Shroom4 / Protein Shroom4 / Q9ULL8* / shroom family member 4*ENSMUSG0000006827017


Protein motifs (from Interpro)
Interpro ID Name
 IPR014799  Apx/Shrm Domain 2
 IPR014800  Apx/Shrm Domain 1
 IPR027685  Shroom family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis IDA
 biological_processGO:0051017 actin filament bundle assembly IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0016460 myosin II complex IDA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr