ENSMUSG00000020680


Mus musculus

Features
Gene ID: ENSMUSG00000020680
  
Biological name :Taf15
  
Synonyms : Taf15 / TATA-box binding protein associated factor 15
  
Possible biological names infered from orthology : Q92804
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: C
Gene start: 83473086
Gene end: 83506743
  
Corresponding Affymetrix probe sets: 10379689 (MoGene1.0st)   1438130_at (Mouse Genome 430 2.0 Array)   1453504_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000021018
Ensembl peptide - ENSMUSP00000119836
NCBI entrez gene - 70439     See in Manteia.
MGI - MGI:1917689
RefSeq - XM_017314756
RefSeq - NM_027427
RefSeq - XM_006534185
RefSeq - XM_006534187
RefSeq - XM_011249252
RefSeq Peptide - NP_081703
swissprot - Q8BQ46
swissprot - F6QCI0
Ensembl - ENSMUSG00000020680
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf15ENSDARG00000070019Danio rerio
 TAF15ENSGALG00000002060Gallus gallus
 TAF15ENSG00000270647Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Fus / P56959 / RNA-binding protein FUS / P35637* / FUS RNA binding protein*ENSMUSG0000003079549
Ewsr1 / Q61545 / RNA-binding protein EWS / Q01844* / EWS RNA binding protein 1*ENSMUSG0000000907943


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001876  Zinc finger, RanBP2-type
 IPR034870  TAF15/EWS/TLS family
 IPR034875  TATA binding associated factor 15
 IPR035979  RNA-binding domain superfamily
 IPR036443  Zinc finger, RanBP2-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005737 cytoplasm ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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