ENSDARG00000070019


Danio rerio

Features
Gene ID: ENSDARG00000070019
  
Biological name :taf15
  
Synonyms : taf15 / TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor
  
Possible biological names infered from orthology : Q92804 / TATA-box binding protein associated factor 15
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 1825172
Gene end: 1844048
  
Corresponding Affymetrix probe sets: Dr.5407.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129551
Ensembl peptide - ENSDARP00000129847
Ensembl peptide - ENSDARP00000093187
Ensembl peptide - ENSDARP00000127709
NCBI entrez gene - 558760     See in Manteia.
swissprot - A1A5X7
swissprot - X1WBW7
swissprot - X1WH41
swissprot - X1WHY2
ZFIN ID - ZDB-GENE-061215-102
Ensembl - ENSDARG00000070019
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAF15ENSGALG00000002060Gallus gallus
 TAF15ENSG00000270647Homo sapiens
 Taf15ENSMUSG00000020680Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fus / FUS RNA binding protein / P35637* / P56959* / RNA-binding protein FUS *ENSDARG0000003796858
ewsr1a / EWS RNA-binding protein 1a / EWSR1* / Q01844* / Q61545* / RNA-binding protein EWS * / EWS RNA binding protein 1*ENSDARG0000002025849
ewsr1b / EWS RNA-binding protein 1b / EWSR1* / Q01844* / Q61545* / RNA-binding protein EWS * / EWS RNA binding protein 1*ENSDARG0000002046544
ewsr1b / EWS RNA-binding protein 1b / EWSR1* / Q01844* / EWS RNA binding protein 1*ENSDARG0000011701130


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001876  Zinc finger, RanBP2-type
 IPR034870  TAF15/EWS/TLS family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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