ENSDARG00000037968


Danio rerio

Features
Gene ID: ENSDARG00000037968
  
Biological name :fus
  
Synonyms : fus / FUS RNA binding protein
  
Possible biological names infered from orthology : P35637 / P56959 / RNA-binding protein FUS
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 32698424
Gene end: 32711280
  
Corresponding Affymetrix probe sets: NM_201083_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000055339
NCBI entrez gene - 394058     See in Manteia.
RefSeq - NM_201083
RefSeq Peptide - NP_957377
swissprot - F1R0M4
ZFIN ID - ZDB-GENE-040426-1010
Ensembl - ENSDARG00000037968
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FUSENSG00000089280Homo sapiens
 FusENSMUSG00000030795Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ewsr1a / EWS RNA-binding protein 1a / EWSR1* / Q01844* / Q61545* / RNA-binding protein EWS * / EWS RNA binding protein 1*ENSDARG0000002025847
taf15 / TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor / Q92804* / TATA-box binding protein associated factor 15*ENSDARG0000007001946
ewsr1b / EWS RNA-binding protein 1b / EWSR1* / Q01844* / Q61545* / RNA-binding protein EWS * / EWS RNA binding protein 1*ENSDARG0000002046542
ewsr1b / EWS RNA-binding protein 1b / EWSR1* / Q01844* / EWS RNA binding protein 1*ENSDARG0000011701130


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001876  Zinc finger, RanBP2-type
 IPR034459  RNA-binding protein FUS
 IPR034870  TAF15/EWS/TLS family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0048675 axon extension IMP
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain absent , abnormal
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 ZFA:0001094 whole organism whole organism absent , abnormal
whole organism decreased amount , abnormal
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 ZFA:0009052 motor neuron motor neuron axon decreased length , abnormal
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 ZFA:0009243 CaP motoneuron CaP motoneuron axon decreased length , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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