ENSDARG00000020465


Danio rerio

Features
Gene ID: ENSDARG00000020465
  
Biological name :ewsr1b
  
Synonyms : ewsr1b / EWS RNA-binding protein 1b
  
Possible biological names infered from orthology : EWSR1 / EWS RNA binding protein 1 / Q01844 / Q61545 / RNA-binding protein EWS
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 24873196
Gene end: 24882360
  
Corresponding Affymetrix probe sets: Dr.4819.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000002269
Ensembl peptide - ENSDARP00000110206
Ensembl peptide - ENSDARP00000112768
NCBI entrez gene - 322880     See in Manteia.
RefSeq - XM_005165107
RefSeq - XM_005165108
swissprot - Q4QRG0
swissprot - A5PMS7
swissprot - Q803E3
ZFIN ID - ZDB-GENE-030131-1600
Ensembl - ENSDARG00000020465
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EWSR1ENSGALG00000008149Gallus gallus
 EWSR1ENSG00000182944Homo sapiens
 Ewsr1ENSMUSG00000009079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ewsr1b / EWS RNA-binding protein 1b / EWSR1* / Q01844* / EWS RNA binding protein 1*ENSDARG0000011701172
ewsr1a / EWS RNA-binding protein 1a / EWSR1* / Q01844* / Q61545* / RNA-binding protein EWS * / EWS RNA binding protein 1*ENSDARG0000002025865
fus / FUS RNA binding protein / P35637* / P56959* / RNA-binding protein FUS *ENSDARG0000003796839
taf15 / TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor / Q92804* / TATA-box binding protein associated factor 15*ENSDARG0000007001933


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001876  Zinc finger, RanBP2-type
 IPR033109  RNA-binding protein EWS
 IPR034870  TAF15/EWS/TLS family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IMP
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0021954 central nervous system neuron development IMP
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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