ENSGALG00000008149


Gallus gallus

Features
Gene ID: ENSGALG00000008149
  
Biological name :EWSR1
  
Synonyms : EWSR1 / RNA-binding protein EWS
  
Possible biological names infered from orthology : EWS RNA binding protein 1 / Q01844 / Q61545
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 11217212
Gene end: 11239199
  
Corresponding Affymetrix probe sets: Gga.8804.1.S1_at (Chicken Array)   GgaAffx.11469.1.S1_at (Chicken Array)   GgaAffx.22481.3.S1_at (Chicken Array)   GgaAffx.22481.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037232
Ensembl peptide - ENSGALP00000057293
Ensembl peptide - ENSGALP00000055117
Ensembl peptide - ENSGALP00000044148
NCBI entrez gene - 417022     See in Manteia.
RefSeq - XM_015294855
RefSeq - NM_001039267
RefSeq - XM_015294853
RefSeq - XM_015294854
RefSeq Peptide - NP_001034356
swissprot - A0A1D5PWG1
swissprot - A0A1D5PQF4
swissprot - A0A1D5NUX9
swissprot - F1NCS2
Ensembl - ENSGALG00000008149
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ewsr1aENSDARG00000020258Danio rerio
 ewsr1bENSDARG00000117011Danio rerio
 ewsr1bENSDARG00000020465Danio rerio
 EWSR1ENSG00000182944Homo sapiens
 Ewsr1ENSMUSG00000009079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TAF15 / TATA-box binding protein associated factor 15 / Q92804*ENSGALG0000000206027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR001876  Zinc finger, RanBP2-type
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR033109  RNA-binding protein EWS


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr