ENSMUSG00000021066


Mus musculus

Features
Gene ID: ENSMUSG00000021066
  
Biological name :Atl1
  
Synonyms : Atl1 / Atlastin-1 / Q8BH66
  
Possible biological names infered from orthology : atlastin GTPase 1 / Q8WXF7
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: C2
Gene start: 69892614
Gene end: 69966417
  
Corresponding Affymetrix probe sets: 10396125 (MoGene1.0st)   1428260_at (Mouse Genome 430 2.0 Array)   1452711_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000152131
Ensembl peptide - ENSMUSP00000021466
NCBI entrez gene - 73991     See in Manteia.
MGI - MGI:1921241
RefSeq - NM_178628
RefSeq Peptide - NP_848743
swissprot - A0A1Y7VLD6
swissprot - Q8BH66
Ensembl - ENSMUSG00000021066
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atl1ENSDARG00000060481Danio rerio
 ATL1ENSGALG00000012339Gallus gallus
 ATL1ENSG00000198513Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Atl2 / Q6PA06 / Mus musculus atlastin GTPase 2 (Atl2), transcript variant 5, mRNA. / Q8NHH9* / atlastin GTPase 2*ENSMUSG0000005981164
Atl3 / Q91YH5 / Atlastin-3 / Q6DD88* / atlastin GTPase 3*ENSMUSG0000002475960
Q96DY5 / Rnf112 / RING finger protein 112 / Q9ULX5*ENSMUSG0000001008619


Protein motifs (from Interpro)
Interpro ID Name
 IPR015894  Guanylate-binding protein, N-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030386  GB1/RHD3-type guanine nucleotide-binding (G) domain
 IPR036543  Guanylate-binding protein, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007029 endoplasmic reticulum organization IEA
 biological_processGO:0007409 axonogenesis IEA
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:1990809 endoplasmic reticulum tubular network membrane organization IEA
 cellular_componentGO:0000137 Golgi cis cisterna IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISS
 cellular_componentGO:0005794 Golgi apparatus ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane ISO
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0071782 endoplasmic reticulum tubular network IDA
 cellular_componentGO:0098826 endoplasmic reticulum tubular network membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000572 abnormal autopod morphology "malformation of the hand or foot" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Apoftm1(KOMP)Vlcg/Apof+
Genetic Background: involves: C57BL/6J * C57BL/6NTac

 MP:0001406 abnormal gait "unusual or distinctive way of walking" [J:65038]
Show

Allelic Composition: Apoftm1(KOMP)Vlcg/Apof+
Genetic Background: involves: C57BL/6J * C57BL/6NTac

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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