ENSMUSG00000021337


Mus musculus

Features
Gene ID: ENSMUSG00000021337
  
Biological name :Scgn
  
Synonyms : Q91WD9 / Scgn / Secretagogin
  
Possible biological names infered from orthology : O76038 / secretagogin, EF-hand calcium binding protein
  
Species: Mus musculus
  
Chr. number: 13
Strand: -1
Band: A3.1
Gene start: 23953456
Gene end: 23991214
  
Corresponding Affymetrix probe sets: 10408268 (MoGene1.0st)   1451534_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000153251
Ensembl peptide - ENSMUSP00000021770
NCBI entrez gene - 214189     See in Manteia.
MGI - MGI:2384873
RefSeq - NM_145399
RefSeq - XM_006516638
RefSeq Peptide - NP_663374
swissprot - A0A286YD29
swissprot - Q91WD9
Ensembl - ENSMUSG00000021337
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scgnENSDARG00000058732Danio rerio
 SCGNENSGALG00000013598Gallus gallus
 SCGNENSG00000079689Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Calb2 / Q08331 / Calretinin / P22676* / calbindin 2*ENSMUSG0000000365733
Calb1 / P12658 / Calbindin / P05937* / calbindin 1*ENSMUSG0000002822232


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR035798  Secretagogin, EF-hand domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051480 regulation of cytosolic calcium ion concentration IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030658 transport vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043005 neuron projection IBA
 cellular_componentGO:0045202 synapse IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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