ENSMUSG00000024665


Mus musculus

Features
Gene ID: ENSMUSG00000024665
  
Biological name :Fads2
  
Synonyms : Fads2 / Fatty acid desaturase 2 / Q9Z0R9
  
Possible biological names infered from orthology : O95864
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: A
Gene start: 10064164
Gene end: 10101503
  
Corresponding Affymetrix probe sets: 10465895 (MoGene1.0st)   1419031_at (Mouse Genome 430 2.0 Array)   1443838_x_at (Mouse Genome 430 2.0 Array)   1449325_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000025567
NCBI entrez gene - 56473     See in Manteia.
MGI - MGI:1930079
RefSeq - NM_019699
RefSeq Peptide - NP_062673
swissprot - Q9Z0R9
Ensembl - ENSMUSG00000024665
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fads2ENSDARG00000019532Danio rerio
 FADS2ENSG00000134824Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Fads3 / Q9JJE7 / Fatty acid desaturase 3 / Q9Y5Q0*ENSMUSG0000002466461
Fads1 / Q920L1 / Fatty acid desaturase 1 / O60427*ENSMUSG0000001066359
Q0VAX3 / 4833423E24Rik / Fatty acid desaturase 2-like protein FADS2P1 ENSMUSG0000007521756


Protein motifs (from Interpro)
Interpro ID Name
 IPR001199  Cytochrome b5-like heme/steroid binding domain
 IPR005804  Fatty acid desaturase domain
 IPR012171  Fatty acid desaturase
 IPR036400  Cytochrome b5-like heme/steroid binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0006636 unsaturated fatty acid biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane TAS
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004768 stearoyl-CoA 9-desaturase activity IDA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
Linoleic acid (LA) metabolism
alpha-linolenic acid (ALA) metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000512 intestinal ulcer "lesions in the mucous lining of the intestine" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Meox1tm1Bmk/Meox1tm1Bmk,Meox2tm1Vpa/Meox2+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000599 enlarged liver "larger than average size of the liver" [J:65146]
Show

Allelic Composition: Meox1tm1Bmk/Meox1tm1Bmk,Meox2tm1Vpa/Meox2+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000691 enlarged spleen "increased spleen size" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0000706 small thymus "reduced size of the thymus" [J:36561, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, J:31167]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0001125 abnormal oocytes "anomalous structure of immature ova" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0001129 impaired ovarian folliculogenesis "a block in the formation of the spherical ovum in the ovary" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0001131 abnormal ovarian follicles "malformed or absent sac-like structure in the ovary which surrounds an ovum" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:33042]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0001132 absent mature ovarian follicles "failure of ovarian follicle differentiation" [J:35782]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0001146 abnormal testis morphology "anomalous structure of the male reproductive glands" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0001156 abnormal spermatogenesis "incomplete maturation or aberrant formation of the male gametes" [J:58959]
Show

Allelic Composition: Meox1tm1Bmk/Meox1tm1Bmk,Meox2tm1Vpa/Meox2+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0001194 dermatitis "inflammation of the skin" [J:65146]
Show

Allelic Composition: Meox1tm1Bmk/Meox1tm1Bmk,Meox2tm1Vpa/Meox2+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0001209 spontaneous skin ulceration "unpredictable appearance of skin lesions, usually with inflammation" [J:65302]
Show

Allelic Composition: Meox1tm1Bmk/Meox1tm1Bmk,Meox2tm1Vpa/Meox2+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
Show

Allelic Composition: Meox1tm1Bmk/Meox1tm1Bmk,Meox2tm1Vpa/Meox2+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0001919 abnormal reproductive system physiology "anomaly in the function of the organs associated with producing offspring " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0001925 male infertility "inability of male to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0001926 female infertility "inability of female to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:34193]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0001929 abnormal gametogenesis "defective formation or differentiation of germ cells" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:42324]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0002223 lymphoid hypoplasia "decreased cell number in lymphatic tissue" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0002357 abnormal spleen white pulp morphology "anomalous structure or formation of the splenic area consisting of lymph nodules and diffuse lymphatic tissue" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0002371 abnormal thymus cortex morphology "anomalous structure or development of the outer area of thymus lobules" [Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0002451 abnormal macrophage physiology "abnormal function or response of the phagocytic leukocytes involved in innate immunity, early non-adaptive phases of host-defense, antigen presentation, and which act as effector cells in humoral and cell-mediated immunity" [Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0002551 abnormal blood coagulation "altered ability or inability of the blood to clot" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0002682 reduced number of mature ovarian follicles "fewer than normal numbers of spehroidal cell aggregations in the ovary containing the ovum" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0002784 abnormal Sertoli cell morphology "malformation of the cells of the seminiferous tubules that create the blood-testes barrier and enable spermatogenesis" [J:65900, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0002981 increased liver weight "a greater than average weight of the bile-secreting exocrine gland" [il:Ira Lu , Mouse Genome Informatics Curator]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0003068 enlarged kidney "larger than average size of the kidney" [J:86005, pvb:Pierre Vanden Borre, Mouse Genome Informatics Curator]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0003356 impaired lutenization "atypical transformation of the mature ovarian follicle and its theca interna into a corpus luteum after ovulation" [anna:Anna Anagnostopoulos, Mouse Genome Informatics Curator, J:57854, J:43075]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0003696 abnormal zona pellucida "anomaly or absence of the thick solid transparent outer membrane that surrounds the developing ovum and embryo prior to implantation" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0003697 absent zona pellucida "missing the thick solid transparent outer membrane that surrounds the developing ovum and embryo prior to implantation" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0004852 decreased testis weight "reduced average weight of the male reproductive glands" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0004884 abnormal testicular physiology "anomaly or loss either the production of male germ cells or the endocrine cells for the production testosterone" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0005159 azoospermia "absence of living spermatozoa " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0005285 decreased unsaturated fatty acid level "less than normal non-circulating level of organic, monobasic acids derived from hydrocarbons in which the carbon chain has one or more double or triple carbon-carbon bonds " [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0005464 abnormal platelet physiology "atypical response of the non-nucleated cells found in the blood and involved in blood coagulation" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0005606 increased bleeding time "greater than the normal duration of blood flow after skin puncture; indicative of platelet and capillary function" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, RGD:Rat Genome Database submission]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0006380 abnormal spermatid morphology "anomaly in the number or structure of the male germ cells that without further cell division give rise to mature spermatozoa" [ISBN:0-8036-0655-99 "Taber s Cyclopedic Medical Dictionary, 19th edition", MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0008279 arrest of spermiogenesis "block in the process by which a spermatid transforms into a functional spermatozoon" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0008476 increased spleen red pulp amount "increase in the quantity of the parenchymatous tissue network of the spleen that consists of loose plates or cords (sinuses) infiltrated with red blood cells where most of the blood filtration occurs and degenerate erythrocytes are removed from the circulation" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0008868 abnormal granulosa cell morphology "any structural anomaly of a supporting cell for the developing female gamete in the ovary of mammals; granulosa cells form a single layer around the mammalian oocyte in the primordial ovarian follicle and advance to form a multilayered cumulus oophorus surrounding the ovum in the Graafian follicle" [MESH:A.05.360.319.114.630.535.200]
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Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0009355 increased liver triglyceride level "higher than normal concentration of triacylglycerols in the liver" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0009368 absent theca folliculi "absence of the internal, external or both layers of the sheath of stroma surrounding a secondary ovarian follicle" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0009549 impaired platelet aggregation "decrease in the ability of one platelet to one or more other platelets via adhesion molecules" [GO:0070527]
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Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0009763 increased sensitivity to induced morbidity/mortality "decrease in the amount of an external agent required to cause death or diseased state" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0009815 decreased prostaglandin level "reduction in the amount in the body of any of a class of mediators with effects of vasodilation, vasoconstriction, and smooth muscle stimulation" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Rom1Rgsc1156/Rom1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0010180 increased susceptibility to weight loss "greater decrease in body weight over time when compared to the average decrease in weight in response to dietary modification, fasting or caloric restriction" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0011940 decreased food intake "reduction in the total number of calories/food amount taken in over time when compared to the normal state" [MGI:csmith]
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Allelic Composition: Fads2tm1Mtna/Fads2tm1Mtna
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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