ENSDARG00000019532


Danio rerio

Features
Gene ID: ENSDARG00000019532
  
Biological name :fads2
  
Synonyms : fads2 / fatty acid desaturase 2
  
Possible biological names infered from orthology : 4833423E24Rik / FADS1 / FADS3 / fatty acid desaturase 1 / Fatty acid desaturase 2-like protein FADS2P1 / fatty acid desaturase 3 / O60427 / O95864 / Q0VAX3 / Q920L1 / Q9JJE7 / Q9Y5Q0 / Q9Z0R9
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 4133488
Gene end: 4148719
  
Corresponding Affymetrix probe sets: Dr.4938.1.S1_at (Zebrafish Array)   NM_131645_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000103548
Ensembl peptide - ENSDARP00000110187
Ensembl peptide - ENSDARP00000022396
NCBI entrez gene - 140615     See in Manteia.
RefSeq - NM_131645
RefSeq Peptide - NP_571720
swissprot - F6NP64
swissprot - F1R3G9
swissprot - F6NZI2
ZFIN ID - ZDB-GENE-011212-1
Ensembl - ENSDARG00000019532
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000020485Gallus gallus
 ENSGALG00000020486Gallus gallus
 ENSGALG00000007127Gallus gallus
 FADS2ENSGALG00000007178Gallus gallus
 FADS1ENSG00000149485Homo sapiens
 FADS2ENSG00000134824Homo sapiens
 FADS3ENSG00000221968Homo sapiens
 Fads1ENSMUSG00000010663Mus musculus
 Fads2ENSMUSG00000024665Mus musculus
 Fads3ENSMUSG00000024664Mus musculus
 Q0VAX3ENSMUSG00000075217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001199  Cytochrome b5-like heme/steroid binding domain
 IPR005804  Fatty acid desaturase domain
 IPR012171  Fatty acid desaturase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
Linoleic acid (LA) metabolism
alpha-linolenic acid (ALA) metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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