ENSMUSG00000028776


Mus musculus

Features
Gene ID: ENSMUSG00000028776
  
Biological name :Tinagl1
  
Synonyms : Q99JR5 / Tinagl1 / Tubulointerstitial nephritis antigen-like
  
Possible biological names infered from orthology : Q9GZM7 / tubulointerstitial nephritis antigen like 1
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.2
Gene start: 130164454
Gene end: 130175122
  
Corresponding Affymetrix probe sets: 10516735 (MoGene1.0st)   1417109_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000101621
Ensembl peptide - ENSMUSP00000135453
Ensembl peptide - ENSMUSP00000030560
Ensembl peptide - ENSMUSP00000101620
Ensembl peptide - ENSMUSP00000134900
NCBI entrez gene - 94242     See in Manteia.
MGI - MGI:2137617
RefSeq - NM_023476
RefSeq - NM_001168333
RefSeq Peptide - NP_001161805
RefSeq Peptide - NP_075965
swissprot - Q99JR5
swissprot - H3BJ97
swissprot - H3BKM8
Ensembl - ENSMUSG00000028776
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tinagl1ENSDARG00000061231Danio rerio
 TINAGL1ENSGALG00000017715Gallus gallus
 Q9GZM7ENSG00000142910Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tinag / tubulointerstitial nephritis antigen / Q9UJW2*ENSMUSG0000003235747
Ctsb / P10605 / cathepsin B / P07858*ENSMUSG0000002193924
Ctsc / P97821 / cathepsin C / P53634*ENSMUSG0000003056022
Ctso / Q8BM88 / cathepsin O / P43234*ENSMUSG0000002801514
Ctsz / Q9WUU7 / cathepsin Z / Q9UBR2*ENSMUSG0000001625614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000668  Peptidase C1A, papain C-terminal
 IPR001212  Somatomedin B domain
 IPR013128  Peptidase C1A
 IPR025660  Cysteine peptidase, histidine active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007155 cell adhesion IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0030247 polysaccharide binding IEA
 molecular_functionGO:0043236 laminin binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001923 reduced female fertility "reduced ability of female to produce live offspring" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409]
Show

Allelic Composition: Manftm1c(KOMP)Wtsi/Manftm1c(KOMP)Wtsi
Genetic Background: involves: C57BL/6N * FVB/N

 MP:0011086 partial postnatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms anytime between the neonatal period and weaning age (Mus: P1 to approximately 3 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Manftm1c(KOMP)Wtsi/Manftm1c(KOMP)Wtsi
Genetic Background: involves: C57BL/6N * FVB/N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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