ENSMUSG00000029369


Mus musculus

Features
Gene ID: ENSMUSG00000029369
  
Biological name :Afm
  
Synonyms : Afamin / Afm / O89020
  
Possible biological names infered from orthology : P43652
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: E1
Gene start: 90518932
Gene end: 90553543
  
Corresponding Affymetrix probe sets: 10523095 (MoGene1.0st)   1427440_a_at (Mouse Genome 430 2.0 Array)   1427561_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000108804
Ensembl peptide - ENSMUSP00000117180
NCBI entrez gene - 280662     See in Manteia.
MGI - MGI:2429409
RefSeq - NM_145146
RefSeq Peptide - NP_660128
swissprot - O89020
Ensembl - ENSMUSG00000029369
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000011658Gallus gallus
 AFMENSG00000079557Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Afp / P02772 / Alpha-fetoprotein / P02771*ENSMUSG0000005493232
5830473C10Rik / RIKEN cDNA 5830473C10 geneENSMUSG0000007069032
Alb / P07724 / Serum albumin / P02768* / albumin*ENSMUSG0000002936830
Gc / P21614 / Vitamin D-binding protein / P02774* / GC, vitamin D binding protein*ENSMUSG0000003554014


Protein motifs (from Interpro)
Interpro ID Name
 IPR000264  ALB/AFP/VDB
 IPR014760  Serum albumin, N-terminal
 IPR020857  Serum albumin, conserved site
 IPR020858  Serum albumin-like
 IPR021177  Serum albumin/Alpha-fetoprotein/Afamin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0050821 protein stabilization ISS
 biological_processGO:0051180 vitamin transport ISO
 biological_processGO:0071693 protein transport within extracellular region ISS
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space ISS
 molecular_functionGO:0008431 vitamin E binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000565 oligodactyly "congenital condition in which some digits or parts of digits are missing" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:53370]
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Allelic Composition: Acp2tm1a(EUCOMM)Wtsi/Acp2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Acp2tm1a(EUCOMM)Wtsi/H

 MP:0003062 abnormal coping response "altered ability to respond productively to a stressful situation or stimulus, or failure to seek pleasurable stimuli" [RGD:Rat Genome Database submission]
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Allelic Composition: Acp2tm1a(EUCOMM)Wtsi/Acp2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Acp2tm1a(EUCOMM)Wtsi/H

 MP:0005564 increased hemoglobin content "increase in the total hemoglobin content in the circulating blood" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, RGD:Rat Genome Database submission]
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Allelic Composition: Acp2tm1a(EUCOMM)Wtsi/Acp2tm1a(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Acp2tm1a(EUCOMM)Wtsi/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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