ENSMUSG00000029699


Mus musculus

Features
Gene ID: ENSMUSG00000029699
  
Biological name :Ssc4d
  
Synonyms : A1L0T3 / scavenger receptor cysteine rich family, 4 domains / Ssc4d
  
Possible biological names infered from orthology : Q8WTU2 / scavenger receptor cysteine rich family member with 4 domains
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: G2
Gene start: 135960211
Gene end: 135974531
  
Corresponding Affymetrix probe sets: 10534537 (MoGene1.0st)   1438147_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000106783
Ensembl peptide - ENSMUSP00000123008
Ensembl peptide - ENSMUSP00000122958
Ensembl peptide - ENSMUSP00000117071
Ensembl peptide - ENSMUSP00000050439
Ensembl peptide - ENSMUSP00000106780
Ensembl peptide - ENSMUSP00000106782
NCBI entrez gene - 109267     See in Manteia.
MGI - MGI:1924709
RefSeq - XM_006504337
RefSeq - NM_001160366
RefSeq - XM_006504335
RefSeq - XM_006504336
RefSeq Peptide - NP_001153838
swissprot - D3YUQ6
swissprot - D3YZ07
swissprot - G3X988
swissprot - A1L0T3
swissprot - F6ZA92
swissprot - F7AS28
Ensembl - ENSMUSG00000029699
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SSC4DENSGALG00000001917Gallus gallus
 SSC4DENSG00000146700Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dmbt1 / Mus musculus deleted in malignant brain tumors 1 (Dmbt1), transcript variant 1, mRNA. / Q9UGM3* / deleted in malignant brain tumors 1*ENSMUSG0000004751744
Cd163 / Q2VLH6 / Scavenger receptor cysteine-rich type 1 protein M130 Soluble CD163 / Q86VB7* / CD163 molecule*ENSMUSG0000000884536
Cd163l1 / CD163 molecule-like 1 / Q4G0T1* / SCART1* / scavenger receptor family member expressed on T cells 1*ENSMUSG0000002546136
5830411N06Rik / RIKEN cDNA 5830411N06 gene / Q4G0T1* / SCART1* / scavenger receptor family member expressed on T cells 1*ENSMUSG0000005467235
Ssc5d / Q8BV57 / Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D / A1L4H1* / scavenger receptor cysteine rich family member with 5 domains*ENSMUSG0000003527934
Q8BZE1 / 5430419D17Rik / Putative DMBT1-like protein ENSMUSG0000000620431
Cd5l / Q9QWK4 / CD5 antigen-like / O43866* / CD5 molecule like*ENSMUSG0000001585423
O08762 / Prss12 / protease, serine 12 neurotrypsin (motopsin) / P56730* / serine protease 12*ENSMUSG0000002797822


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR017448  SRCR-like domain
 IPR036772  SRCR-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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