ENSMUSG00000030512


Mus musculus

Features
Gene ID: ENSMUSG00000030512
  
Biological name :Snrpa1
  
Synonyms : P57784 / small nuclear ribonucleoprotein polypeptide A / Snrpa1
  
Possible biological names infered from orthology : P09661
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: C
Gene start: 66059003
Gene end: 66074587
  
Corresponding Affymetrix probe sets: 10553993 (MoGene1.0st)   1417351_a_at (Mouse Genome 430 2.0 Array)   1417352_s_at (Mouse Genome 430 2.0 Array)   1417353_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000032723
Ensembl peptide - ENSMUSP00000117947
NCBI entrez gene - 68981     See in Manteia.
MGI - MGI:1916231
RefSeq - NM_021336
RefSeq Peptide - NP_067311
swissprot - G5E883
swissprot - P57784
Ensembl - ENSMUSG00000030512
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snrpa1ENSDARG00000024651Danio rerio
 SNRPA1ENSGALG00000007170Gallus gallus
 P09661ENSG00000131876Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm45213ENSMUSG0000010879320


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003603  U2A"/phosphoprotein 32 family A, C-terminal
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005681 spliceosomal complex ISO
 cellular_componentGO:0005686 U2 snRNP IBA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030620 U2 snRNA binding IBA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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