ENSMUSG00000037957


Mus musculus

Features
Gene ID: ENSMUSG00000037957
  
Biological name :Wdr20
  
Synonyms : Wdr20 / WD repeat domain 20
  
Possible biological names infered from orthology : Q8TBZ3
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: F1
Gene start: 110737944
Gene end: 110804238
  
Corresponding Affymetrix probe sets: 10398562 (MoGene1.0st)   1428039_at (Mouse Genome 430 2.0 Array)   1431227_at (Mouse Genome 430 2.0 Array)   1449197_at (Mouse Genome 430 2.0 Array)   1451220_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142157
Ensembl peptide - ENSMUSP00000093059
Ensembl peptide - ENSMUSP00000141678
Ensembl peptide - ENSMUSP00000141887
NCBI entrez gene - 69641     See in Manteia.
MGI - MGI:1916891
RefSeq - XM_006516208
RefSeq - NM_001347428
RefSeq - NM_027149
RefSeq - XM_006516203
RefSeq - XM_006516204
RefSeq Peptide - NP_081425
RefSeq Peptide - NP_001334357
swissprot - Q3UWE6
swissprot - A0A0A6YXV5
swissprot - Q9D721
swissprot - A0A0A6YX87
Ensembl - ENSMUSG00000037957
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr20aENSDARG00000079220Danio rerio
 wdr20bENSDARG00000041239Danio rerio
 WDR20ENSGALG00000011365Gallus gallus
 WDR20ENSG00000140153Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9D5R2 / Wdr20rt / WD repeat domain 20, retrogene / WDR20* / Q8TBZ3* / WD repeat domain 20*ENSMUSG0000003556093
Dmwd / Q08274 / Dystrophia myotonica WD repeat-containing protein / Q09019* / DM1 locus, WD repeat containing*ENSMUSG0000003041059


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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