ENSG00000140153


Homo sapiens

Features
Gene ID: ENSG00000140153
  
Biological name :WDR20
  
Synonyms : Q8TBZ3 / WDR20 / WD repeat domain 20
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: 1
Band: q32.31
Gene start: 102139503
Gene end: 102224847
  
Corresponding Affymetrix probe sets: 1554549_a_at (Human Genome U133 Plus 2.0 Array)   227541_at (Human Genome U133 Plus 2.0 Array)   227693_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000452774
Ensembl peptide - ENSP00000452638
Ensembl peptide - ENSP00000454151
Ensembl peptide - ENSP00000299135
Ensembl peptide - ENSP00000314209
Ensembl peptide - ENSP00000335434
Ensembl peptide - ENSP00000341037
Ensembl peptide - ENSP00000395793
Ensembl peptide - ENSP00000406084
Ensembl peptide - ENSP00000450636
Ensembl peptide - ENSP00000451633
Ensembl peptide - ENSP00000452470
Ensembl peptide - ENSP00000452539
NCBI entrez gene - 91833     See in Manteia.
OMIM - 617741
RefSeq - XM_017021785
RefSeq - XM_011537353
RefSeq - XM_011537356
RefSeq - XM_011537358
RefSeq - XM_017021766
RefSeq - XM_017021767
RefSeq - XM_017021768
RefSeq - XM_017021770
RefSeq - XM_017021771
RefSeq - XM_017021773
RefSeq - XM_017021774
RefSeq - XM_017021775
RefSeq - XM_017021776
RefSeq - XM_017021777
RefSeq - XM_017021778
RefSeq - XM_017021779
RefSeq - XM_017021781
RefSeq - XM_017021782
RefSeq - XM_017021783
RefSeq - NM_001242414
RefSeq - NM_001242415
RefSeq - NM_001242416
RefSeq - NM_001242417
RefSeq - NM_001242418
RefSeq - NM_001320130
RefSeq - NM_001330228
RefSeq - NM_001353659
RefSeq - NM_144574
RefSeq - NM_181291
RefSeq - NM_181308
RefSeq - XM_006720308
RefSeq - XM_006720313
RefSeq - XM_006720318
RefSeq - XM_006720320
RefSeq - XM_011537335
RefSeq - XM_011537336
RefSeq - XM_011537337
RefSeq - XM_011537338
RefSeq - XM_011537339
RefSeq - XM_011537340
RefSeq - XM_011537341
RefSeq - XM_011537343
RefSeq - XM_011537345
RefSeq - XM_011537352
RefSeq Peptide - NP_001229345
RefSeq Peptide - NP_001340610
RefSeq Peptide - NP_653175
RefSeq Peptide - NP_851808
RefSeq Peptide - NP_851825
RefSeq Peptide - NP_001229343
RefSeq Peptide - NP_001229344
RefSeq Peptide - NP_001229346
RefSeq Peptide - NP_001229347
RefSeq Peptide - NP_001307059
RefSeq Peptide - NP_001317157
RefSeq Peptide - NP_001340588
swissprot - H0YK31
swissprot - H0YKE8
swissprot - H0YNU0
swissprot - Q8TBZ3
swissprot - A0A088AWN2
swissprot - G3V5V2
Ensembl - ENSG00000140153
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 wdr20aENSDARG00000079220Danio rerio
 wdr20bENSDARG00000041239Danio rerio
 WDR20ENSGALG00000011365Gallus gallus
 Q9D5R2ENSMUSG00000035560Mus musculus
 Wdr20ENSMUSG00000037957Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DMWD / Q09019 / DM1 locus, WD repeat containingENSG0000018580055


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016579 protein deubiquitination IBA
 cellular_componentGO:0005654 nucleoplasm TAS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity TAS


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000114742 WDR48 / Q8TAF3 / WD repeat domain 48  / complex
 ENSG00000152484 USP12 / O75317 / ubiquitin specific peptidase 12  / complex
 ENSG00000169083 AR / P10275 / androgen receptor  / complex






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr