ENSMUSG00000039824


Mus musculus

Features
Gene ID: ENSMUSG00000039824
  
Biological name :Myl6b
  
Synonyms : Myl6b / Myosin light chain 6B / Q8CI43
  
Possible biological names infered from orthology : P14649
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: D3
Gene start: 128494157
Gene end: 128498685
  
Corresponding Affymetrix probe sets: 10373400 (MoGene1.0st)   1430661_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000026428
NCBI entrez gene - 216459     See in Manteia.
MGI - MGI:1917789
RefSeq - XM_017313917
RefSeq - NM_172259
RefSeq - XM_017313915
RefSeq - XM_017313916
RefSeq - XM_017313913
RefSeq - XM_017313914
RefSeq Peptide - NP_758463
swissprot - Q8CI43
Ensembl - ENSMUSG00000039824
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 myl6ENSDARG00000008494Danio rerio
 zgc:153867ENSDARG00000033738Danio rerio
 MYL6BENSG00000196465Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Myl1 / P05977 / Myosin light chain 1/3, skeletal muscle isoform / P05976* / myosin light chain 1*ENSMUSG0000006181662
Myl3 / P09542 / Myosin light chain 3 / P08590*ENSMUSG0000005974161
Myl4 / Mus musculus myosin, light polypeptide 4 (Myl4), transcript variant 2, mRNA. / P12829* / myosin light chain 4*ENSMUSG0000006108658
Myl6 / Q60605 / myosin, light polypeptide 6, alkali, smooth muscle and non-muscle / P60660* / myosin light chain 6*ENSMUSG0000009084155


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction TAS
 biological_processGO:0007519 skeletal muscle tissue development TAS
 biological_processGO:0030049 muscle filament sliding TAS
 cellular_componentGO:0016459 myosin complex TAS
 cellular_componentGO:0016461 unconventional myosin complex TAS
 molecular_functionGO:0003774 motor activity TAS
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008307 structural constituent of muscle TAS


Pathways (from Reactome)
Pathway description
Smooth Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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