Manteia

ENSMUSG00000041729

Mus musculus

Features

Gene ID:	ENSMUSG00000041729

Biological name :	Coro2b

Synonyms :	Coro2b / Coronin-2B / Q8BH44

Possible biological names infered from orthology :	Q9UQ03

Species:	Mus musculus

Chr. number:	9
Strand:	-1
Band:	B
Gene start:	62419492
Gene end:	62537044

Corresponding Affymetrix probe sets:	10594301 (MoGene1.0st) 1434326_x_at (Mouse Genome 430 2.0 Array) 1434755_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000041826 Ensembl peptide - ENSMUSP00000128441 Ensembl peptide - ENSMUSP00000133481 Ensembl peptide - ENSMUSP00000134079 Ensembl peptide - ENSMUSP00000134709 NCBI entrez gene - 235431 See in Manteia. MGI - MGI:2444283 RefSeq - XM_006511094 RefSeq - XM_006511097 RefSeq - XM_006511098 RefSeq - XM_006511099 RefSeq - XM_006511100 RefSeq - XM_006511095 RefSeq - NM_175484 RefSeq Peptide - NP_780693 swissprot - Q8BH44 swissprot - G3UYG8 swissprot - G3V005 swissprot - G3UW48 swissprot - G3UWZ2 Ensembl - ENSMUSG00000041729

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
Coro2a / Q8C0P5 / Coronin-2A / Q92828*	ENSMUSG00000028337	65
Coro6 / Q920M5 / Coronin-6 / Q6QEF8*	ENSMUSG00000020836	44
Coro1c / Q9WUM4 / Coronin-1C / Q9ULV4*	ENSMUSG00000004530	43
Coro1a / O89053 / Coronin-1A / P31146*	ENSMUSG00000030707	43
Coro1b / Q9WUM3 / Coronin-1B / Q9BR76*	ENSMUSG00000024835	42
Coro7 / Q9D2V7 / Coronin-7 / P57737* / CORO7-PAM16* / CORO7-PAM16 readthrough*	ENSMUSG00000039637	29

Protein motifs (from Interpro)

Interpro ID	Name
IPR001680	WD40 repeat
IPR011042	Six-bladed beta-propeller, TolB-like
IPR015048	Domain of unknown function DUF1899
IPR015505	Coronin
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR017986	WD40-repeat-containing domain
IPR019775	WD40 repeat, conserved site
IPR027339	Coronin 2B
IPR036322	WD40-repeat-containing domain superfamily

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0030036	actin cytoskeleton organization	IEA
cellular_component	GO:0005737	cytoplasm	IEA
cellular_component	GO:0005856	cytoskeleton	IEA
cellular_component	GO:0015629	actin cytoskeleton	IBA
cellular_component	GO:0016020	membrane	IEA
molecular_function	GO:0003779	actin binding	IEA
molecular_function	GO:0005515	protein binding	IEA
molecular_function	GO:0051015	actin filament binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
MP:0003566	abnormal cell adhesion	"altered ability of a cell to adhere to another cell or to a non-cellular component of the environment" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]	Show Allelic Composition: Ncr1^m1J/Ncr1^m1J,Pepc^b/Pepc^b,Ptprc^a/Ptprc^a Genetic Background: B6.SJL-Ptprc^a Pepc^b/BoyJ
MP:0005325	abnormal glomerulus	"anomalous structure of the capillary loops of the kidney that normally function as a filtration unit" [J:57971, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]	Show Allelic Composition: Ncr1^m1J/Ncr1^m1J,Pepc^b/Pepc^b,Ptprc^a/Ptprc^a Genetic Background: B6.SJL-Ptprc^a Pepc^b/BoyJ
MP:0006315	abnormal kidney protein excretion	"anomaly in the amount of protein eliminated by the kidneys" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]	Show Allelic Composition: Ncr1^m1J/Ncr1^m1J,Pepc^b/Pepc^b,Ptprc^a/Ptprc^a Genetic Background: B6.SJL-Ptprc^a Pepc^b/BoyJ

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr