ENSMUSG00000041781


Mus musculus

Features
Gene ID: ENSMUSG00000041781
  
Biological name :Cpsf2
  
Synonyms : Cleavage and polyadenylation specificity factor subunit 2 / Cpsf2 / O35218
  
Possible biological names infered from orthology : cleavage and polyadenylation specific factor 2 / Q9P2I0
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: E
Gene start: 101975988
Gene end: 102006424
  
Corresponding Affymetrix probe sets: 10397818 (MoGene1.0st)   1420936_s_at (Mouse Genome 430 2.0 Array)   1420937_at (Mouse Genome 430 2.0 Array)   1431089_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000047797
NCBI entrez gene - 51786     See in Manteia.
MGI - MGI:1861601
RefSeq - NM_016856
RefSeq - XM_006516071
RefSeq Peptide - NP_058552
swissprot - O35218
Ensembl - ENSMUSG00000041781
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cpsf2ENSDARG00000028971Danio rerio
 CPSF2ENSGALG00000010783Gallus gallus
 CPSF2ENSG00000165934Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001279  Metallo-beta-lactamase
 IPR011108  Zn-dependent metallo-hydrolase, RNA specificity domain
 IPR022712  Beta-Casp domain
 IPR025069  Cleavage and polyadenylation specificity factor 2, C-terminal
 IPR027075  Cleavage and polyadenylation specificity factor subunit 2
 IPR035639  CPSF2, metallo-hydrolase domain
 IPR036866  Ribonuclease Z/Hydroxyacylglutathione hydrolase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006378 mRNA polyadenylation IEA
 biological_processGO:0006379 mRNA cleavage IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006398 mRNA 3"-end processing by stem-loop binding and cleavage IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex ISO
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
mRNA Splicing - Major Pathway
mRNA 3-end processing
Processing of Intronless Pre-mRNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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