ENSMUSG00000042331


Mus musculus

Features
Gene ID: ENSMUSG00000042331
  
Biological name :Specc1
  
Synonyms : Q5SXY1 / Specc1 / sperm antigen with calponin homology and coiled-coil domains 1
  
Possible biological names infered from orthology : Q5M775
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B2
Gene start: 61956763
Gene end: 62223013
  
Corresponding Affymetrix probe sets: 10376813 (MoGene1.0st)   1428794_at (Mouse Genome 430 2.0 Array)   1458440_at (Mouse Genome 430 2.0 Array)   1459415_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000144161
Ensembl peptide - ENSMUSP00000144659
Ensembl peptide - ENSMUSP00000144542
Ensembl peptide - ENSMUSP00000144483
Ensembl peptide - ENSMUSP00000144311
Ensembl peptide - ENSMUSP00000144300
Ensembl peptide - ENSMUSP00000144174
Ensembl peptide - ENSMUSP00000063102
Ensembl peptide - ENSMUSP00000090071
Ensembl peptide - ENSMUSP00000104349
Ensembl peptide - ENSMUSP00000143853
Ensembl peptide - ENSMUSP00000144030
Ensembl peptide - ENSMUSP00000144055
NCBI entrez gene - 432572     See in Manteia.
MGI - MGI:2442356
RefSeq - XM_017314640
RefSeq - NM_001029936
RefSeq - NM_001281818
RefSeq - NM_001310526
RefSeq - XM_006533656
RefSeq - XM_011249106
RefSeq Peptide - NP_001025107
RefSeq Peptide - NP_001268747
RefSeq Peptide - NP_001297455
swissprot - A0A0J9YUR2
swissprot - A0A0J9YUG8
swissprot - A0A0J9YUF8
swissprot - A0A0J9YTU3
swissprot - A0A0J9YV47
swissprot - Q5SXY1
swissprot - A0A0J9YV86
Ensembl - ENSMUSG00000042331
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 specc1ENSDARG00000029480Danio rerio
 SPECC1ENSGALG00000004400Gallus gallus
 Q5M775ENSG00000128487Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q2KN98 / Specc1l / sperm antigen with calponin homology and coiled-coil domains 1-like / Q69YQ0* / SPECC1L-ADORA2A* / SPECC1L-ADORA2A readthrough (NMD candidate)*ENSMUSG0000003344441
Mical3 / Q8CJ19 / [F-actin]-monooxygenase MICAL3 / Q7RTP6* / microtubule associated monooxygenase, calponin and LIM domain containing 3*ENSMUSG0000005158613
Q8BML1 / Mical2 / [F-actin]-monooxygenase MICAL2 / O94851* / Q6ZW33* / microtubule associated monooxygenase, calponin and LIM domain containing 2*ENSMUSG0000003824411
Mical1 / Q8VDP3 / Mus musculus microtubule associated monooxygenase, calponin and LIM domain containing 1 (Mical1), transcript variant 4, mRNA. / Q8TDZ2* / microtubule associated monooxygen...ENSMUSG0000001982311
Ehbp1l1 / EH domain-binding protein 1-like protein 1 isoform C / Q8N3D4* / EH domain binding protein 1 like 1*ENSMUSG000000249379
Ehbp1 / Q69ZW3 / EH domain-binding protein 1 / Q8NDI1*ENSMUSG000000423028
Q3TN34 / Micall2 / MICAL-like protein 2 / Q8IY33* / MICAL like 2*ENSMUSG000000367187
AC132392.1ENSMUSG000001111877
Q9D5U9 / Micalcl / MICAL C-terminal-like protein ENSMUSG000000307717
Q8BGT6 / Micall1 / MICAL-like protein 1 / Q8N3F8* / MICAL like 1*ENSMUSG000000330396
Smtn / Q921U8 / Smoothelin / P53814*ENSMUSG000000204395
Q8CI12 / Smtnl2 / Smoothelin-like protein 2 / Q2TAL5* / smoothelin like 2*ENSMUSG000000456672
Q99LM3 / Smtnl1 / Smoothelin-like protein 1 / A8MU46* / smoothelin like 1*ENSMUSG000000270772


Protein motifs (from Interpro)
Interpro ID Name
 IPR001715  Calponin homology domain
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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