ENSG00000128487


Homo sapiens

Features
Gene ID: ENSG00000128487
  
Biological name :SPECC1
  
Synonyms : Q5M775 / SPECC1 / sperm antigen with calponin homology and coiled-coil domains 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p11.2
Gene start: 20009344
Gene end: 20319026
  
Corresponding Affymetrix probe sets: 223498_at (Human Genome U133 Plus 2.0 Array)   228900_at (Human Genome U133 Plus 2.0 Array)   244461_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000464489
Ensembl peptide - ENSP00000464341
Ensembl peptide - ENSP00000464639
Ensembl peptide - ENSP00000261503
Ensembl peptide - ENSP00000378893
Ensembl peptide - ENSP00000378896
Ensembl peptide - ENSP00000378898
Ensembl peptide - ENSP00000378900
Ensembl peptide - ENSP00000378901
Ensembl peptide - ENSP00000461918
Ensembl peptide - ENSP00000461944
Ensembl peptide - ENSP00000462092
Ensembl peptide - ENSP00000462266
Ensembl peptide - ENSP00000462471
Ensembl peptide - ENSP00000462987
Ensembl peptide - ENSP00000463006
Ensembl peptide - ENSP00000463130
Ensembl peptide - ENSP00000463799
NCBI entrez gene - 92521     See in Manteia.
OMIM - 608793
RefSeq - XM_017025325
RefSeq - NM_001033553
RefSeq - NM_001033554
RefSeq - NM_001033555
RefSeq - NM_001243438
RefSeq - NM_001243439
RefSeq - NM_152904
RefSeq - XM_005256860
RefSeq - XM_011524075
RefSeq - XM_017025317
RefSeq - XM_017025318
RefSeq - XM_017025319
RefSeq - XM_017025320
RefSeq - XM_017025321
RefSeq - XM_017025322
RefSeq - XM_017025323
RefSeq - XM_017025324
RefSeq Peptide - NP_001028725
RefSeq Peptide - NP_001028726
RefSeq Peptide - NP_001028727
RefSeq Peptide - NP_001230367
RefSeq Peptide - NP_001230368
RefSeq Peptide - NP_690868
swissprot - J3KSG2
swissprot - J3KTH6
swissprot - Q5M775
swissprot - J3QKL1
swissprot - J3QQM0
swissprot - J3QRQ9
swissprot - J3QS22
swissprot - J3QSD6
swissprot - J3KTI9
swissprot - A0A024QYY9
swissprot - J3KRB9
swissprot - J3KRD8
swissprot - J3KRN9
swissprot - J3KS18
Ensembl - ENSG00000128487
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 specc1ENSDARG00000029480Danio rerio
 SPECC1ENSGALG00000004400Gallus gallus
 Q5SXY1ENSMUSG00000042331Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q69YQ0 / SPECC1L / sperm antigen with calponin homology and coiled-coil domains 1 likeENSG0000010001441
SPECC1L-ADORA2A / SPECC1L-ADORA2A readthrough (NMD candidate)ENSG0000025855530
MICAL3 / Q7RTP6 / microtubule associated monooxygenase, calponin and LIM domain containing 3ENSG0000024315613
MICAL1 / Q8TDZ2 / microtubule associated monooxygenase, calponin and LIM domain containing 1ENSG0000013559612
MICAL2 / O94851 / Q6ZW33 / microtubule associated monooxygenase, calponin and LIM domain containing 2ENSG0000013381611
Q8N3D4 / EHBP1L1 / EH domain binding protein 1 like 1ENSG0000017344210
Q8IY33 / MICALL2 / MICAL like 2ENSG000001648778
EHBP1 / Q8NDI1 / EH domain binding protein 1ENSG000001155048
Q8N3F8 / MICALL1 / MICAL like 1ENSG000001001397
SMTN / P53814 / smoothelinENSG000001839635
Q2TAL5 / SMTNL2 / smoothelin like 2ENSG000001881763
A8MU46 / SMTNL1 / smoothelin like 1ENSG000002148722


Protein motifs (from Interpro)
Interpro ID Name
 IPR001715  Calponin homology domain
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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