ENSG00000188176


Homo sapiens

Features
Gene ID: ENSG00000188176
  
Biological name :SMTNL2
  
Synonyms : Q2TAL5 / smoothelin like 2 / SMTNL2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.2
Gene start: 4583999
Gene end: 4608319
  
Corresponding Affymetrix probe sets: 229730_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000345143
Ensembl peptide - ENSP00000373964
Ensembl peptide - ENSP00000460663
NCBI entrez gene - 342527     See in Manteia.
RefSeq - XM_006721515
RefSeq - NM_001114974
RefSeq - NM_198501
RefSeq - XM_005256622
RefSeq Peptide - NP_940903
RefSeq Peptide - NP_001108446
swissprot - Q2TAL5
swissprot - I3L3R4
Ensembl - ENSG00000188176
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smtnlENSDARG00000055632Danio rerio
 SMTNL2ENSGALG00000006069Gallus gallus
 Q8CI12ENSMUSG00000045667Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SMTN / P53814 / smoothelinENSG0000018396341
A8MU46 / SMTNL1 / smoothelin like 1ENSG0000021487224
Q8N3D4 / EHBP1L1 / EH domain binding protein 1 like 1ENSG0000017344218
MICAL2 / O94851 / Q6ZW33 / microtubule associated monooxygenase, calponin and LIM domain containing 2ENSG0000013381615
MICAL3 / Q7RTP6 / microtubule associated monooxygenase, calponin and LIM domain containing 3ENSG0000024315615
MICAL1 / Q8TDZ2 / microtubule associated monooxygenase, calponin and LIM domain containing 1ENSG0000013559615
EHBP1 / Q8NDI1 / EH domain binding protein 1ENSG0000011550413
Q8N3F8 / MICALL1 / MICAL like 1ENSG000001001399
Q8IY33 / MICALL2 / MICAL like 2ENSG000001648778
Q69YQ0 / SPECC1L / sperm antigen with calponin homology and coiled-coil domains 1 likeENSG000001000147
SPECC1L-ADORA2A / SPECC1L-ADORA2A readthrough (NMD candidate)ENSG000002585557
Q5M775 / SPECC1 / sperm antigen with calponin homology and coiled-coil domains 1ENSG000001284876


Protein motifs (from Interpro)
Interpro ID Name
 IPR001715  Calponin homology domain
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr