ENSMUSG00000042759


Mus musculus

Features
Gene ID: ENSMUSG00000042759
  
Biological name :Apobr
  
Synonyms : Apobr / Apolipoprotein B receptor / Q8VBT6
  
Possible biological names infered from orthology : Q0VD83
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: F3
Gene start: 126584942
Gene end: 126589112
  
Corresponding Affymetrix probe sets: 10557434 (MoGene1.0st)   1420382_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000042028
Ensembl peptide - ENSMUSP00000146092
Ensembl peptide - ENSMUSP00000145626
Ensembl peptide - ENSMUSP00000145620
Ensembl peptide - ENSMUSP00000145535
NCBI entrez gene - 171504     See in Manteia.
MGI - MGI:2176230
RefSeq - XM_006507401
RefSeq - NM_138310
RefSeq - XM_006507399
RefSeq - XM_006507400
RefSeq Peptide - NP_612183
swissprot - A0A0U1RPR7
swissprot - Q8VBT6
swissprot - A0A0U1RNM0
swissprot - A0A0U1RNE8
swissprot - A0A0U1RNM5
Ensembl - ENSMUSG00000042759
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 APOBRENSG00000184730Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026158  Apolipoprotein B receptor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006641 triglyceride metabolic process IDA
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0008202 steroid metabolic process IEA
 biological_processGO:0008203 cholesterol metabolic process IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0034361 very-low-density lipoprotein particle IEA
 cellular_componentGO:0034362 low-density lipoprotein particle IEA
 cellular_componentGO:0042627 chylomicron IEA
 molecular_functionGO:0030228 lipoprotein particle receptor activity IEA
 molecular_functionGO:0030229 very-low-density lipoprotein particle receptor activity IDA


Pathways (from Reactome)
Pathway description
VLDL clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000074336 Apoc4 / Q61268 / Apolipoprotein C-IV / P55056* / APOC4-APOC2* / apolipoprotein C4* / APOC4-APOC2 readthrough (NMD candidate)*  / complex / reaction
 ENSMUSG00000042759 Apobr / Q8VBT6 / Apolipoprotein B receptor / Q0VD83*  / complex
 ENSMUSG00000040564 Apoc1 / P34928 / Apolipoprotein C-I Truncated apolipoprotein C-I / P02654* / apolipoprotein C1*  / reaction / complex






 

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