ENSMUSG00000043091


Mus musculus

Features
Gene ID: ENSMUSG00000043091
  
Biological name :Tuba1c
  
Synonyms : P68373 / Tuba1c / tubulin, alpha 1C
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: F1
Gene start: 99029891
Gene end: 99038110
  
Corresponding Affymetrix probe sets: 10426650 (MoGene1.0st)   10432398 (MoGene1.0st)   10587780 (MoGene1.0st)   10592058 (MoGene1.0st)   1416128_at (Mouse Genome 430 2.0 Array)   1448232_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000051033
NCBI entrez gene - 22146     See in Manteia.
MGI - MGI:1095409
RefSeq - NM_009448
RefSeq Peptide - NP_033474
swissprot - P68373
swissprot - Q52L87
Ensembl - ENSMUSG00000043091
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TUBA1CENSGALG00000040260Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P68369 / Tuba1a / tubulin, alpha 1A / Q71U36*ENSMUSG0000007223599
P05213 / Tuba1b / tubulin, alpha 1B / P68363*ENSMUSG0000002300499
P05214 / Tuba3a / tubulin, alpha 3A / Q13748* / TUBA3C* / tubulin alpha 3c*ENSMUSG0000006770297
Tuba3b / P05214 / tubulin, alpha 3B / TUBA3D* / Q13748* / Q6PEY2* / TUBA3E* / tubulin alpha 3d* / tubulin alpha 3e*ENSMUSG0000006733897
P68368 / Tuba4a / tubulin, alpha 4A / P68366*ENSMUSG0000002620296
AC161165.4 / Q9BQE3* / TUBA1C* / tubulin alpha 1c*ENSMUSG0000011635859


Protein motifs (from Interpro)
Interpro ID Name
 IPR000217  Tubulin
 IPR002452  Alpha tubulin
 IPR003008  Tubulin/FtsZ, GTPase domain
 IPR008280  Tubulin/FtsZ, C-terminal
 IPR017975  Tubulin, conserved site
 IPR018316  Tubulin/FtsZ, 2-layer sandwich domain
 IPR036525  Tubulin/FtsZ, GTPase domain superfamily
 IPR037103  Tubulin/FtsZ, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007017 microtubule-based process IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005881 cytoplasmic microtubule IDA
 cellular_componentGO:0015630 microtubule cytoskeleton ISO
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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