Manteia

ENSMUSG00000023004

Mus musculus

Features

Gene ID:	ENSMUSG00000023004

Biological name :	Tuba1b

Synonyms :	P05213 / Tuba1b / tubulin, alpha 1B

Possible biological names infered from orthology :	P68363

Species:	Mus musculus

Chr. number:	15
Strand:	-1
Band:	F1
Gene start:	98931425
Gene end:	98934565

Corresponding Affymetrix probe sets:	10426650 (MoGene1.0st) 10432398 (MoGene1.0st) 10587780 (MoGene1.0st) 10592058 (MoGene1.0st) 1423846_x_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000076777 NCBI entrez gene - 22143 See in Manteia. MGI - MGI:107804 RefSeq - NM_011654 RefSeq - XM_006520756 RefSeq Peptide - NP_035784 swissprot - P05213 Ensembl - ENSMUSG00000023004

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
P68369 / Tuba1a / tubulin, alpha 1A / Q71U36*	ENSMUSG00000072235	100
P68373 / Tuba1c / tubulin, alpha 1C	ENSMUSG00000043091	98
P05214 / Tuba3a / tubulin, alpha 3A / Q13748* / TUBA3C* / tubulin alpha 3c*	ENSMUSG00000067702	97
Tuba3b / P05214 / tubulin, alpha 3B / TUBA3D* / Q13748* / Q6PEY2* / TUBA3E* / tubulin alpha 3d* / tubulin alpha 3e*	ENSMUSG00000067338	97
P68368 / Tuba4a / tubulin, alpha 4A / P68366*	ENSMUSG00000026202	96
AC161165.4 / Q9BQE3* / TUBA1C* / tubulin alpha 1c*	ENSMUSG00000116358	59

Protein motifs (from Interpro)

Interpro ID	Name
IPR000217	Tubulin
IPR002452	Alpha tubulin
IPR003008	Tubulin/FtsZ, GTPase domain
IPR008280	Tubulin/FtsZ, C-terminal
IPR017975	Tubulin, conserved site
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain
IPR036525	Tubulin/FtsZ, GTPase domain superfamily
IPR037103	Tubulin/FtsZ, C-terminal domain superfamily

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0000226	microtubule cytoskeleton organization	IDA
biological_process	GO:0007017	microtubule-based process	IEA
biological_process	GO:0071353	cellular response to interleukin-4	IDA
cellular_component	GO:0005737	cytoplasm	IEA
cellular_component	GO:0005829	cytosol	TAS
cellular_component	GO:0005856	cytoskeleton	IEA
cellular_component	GO:0005874	microtubule	ISO
cellular_component	GO:0005881	cytoplasmic microtubule	IDA
cellular_component	GO:0015630	microtubule cytoskeleton	IEA
cellular_component	GO:0043209	myelin sheath	IDA
cellular_component	GO:0045121	membrane raft	IEA
molecular_function	GO:0000166	nucleotide binding	IEA
molecular_function	GO:0003725	double-stranded RNA binding	IEA
molecular_function	GO:0003924	GTPase activity	IEA
molecular_function	GO:0005200	structural constituent of cytoskeleton	IDA
molecular_function	GO:0005515	protein binding	IPI
molecular_function	GO:0005525	GTP binding	IEA
molecular_function	GO:0031625	ubiquitin protein ligase binding	IEA

Pathways (from Reactome)

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr